Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00423 ATGAGAGACCTAGTTTCATGTTTGAGTGAAAACTCAATAAACTTTTCAAATCCTTCATGTTCCAGCTACTCTAACAACCAATGCATCACACCAAGCACTCATTCATCTTCAAATTCAACCCAAACCTCAATTTCATGTATTTACAAACTAGTCCTCTCAACCTCGAAACAAATTCTAATCACTGTCACATGGTGCAGAAATCATTCGAATCAAGGACTCACCATATCCTTCAACAACCAAGATCCATCCATCAACACAAACTCACGCTTCTTCCGCAAGAAAAAAGGCAGCAAACTCATCGATTTCCACGATTCCAAGGTAACTATCCTATGGGATCTGTCAAACGCAAGATACGAAACGTCGACATCGCCGGAGCCGCTTCAGTTCTACTACGTCGTGGTGGTTGTAGACTCCGAACTCGGTTTAATCCTCGGAGATTCAGAAACCATAGCTACAAAAATGAAGGATAGCATTCCAATGGCGAAGGTTTCACTCTTGTCACGTCGAGAATATTGTTCCTCAGCTTGGAGAAACAAAGGGAATCAGACCATTTTTGTTGATGGTTTGTTGGTTGATTTGCTTTGGGATGTTCATGATTGGTTCTTCAATTCTAGTTCGAGTTCGGGTTCGAGTTTGAGTTCGGGTTCTGGTGTTTTTATGTTTAGGACAAGGAGTGGTTTGGATAGTAGATTATGGTTGGAAGAGAAGAATTCTCACAAAGATAAAGATAGAATTGAGTTCTCATTCTTCATCTATGCAAGTACCTTGACATGTGTTTATGACTCCATGGCCCCTCCATTTTCAACTTCACTCATACTCATACAATACAAATTATTACCAGCTACTTTGTGGGTGCATGTGCTTTACATGCATATCCTAAATAAATAG 888 0.4009 MRDLVSCLSENSINFSNPSCSSYSNNQCITPSTHSSSNSTQTSISCIYKLVLSTSKQILITVTWCRNHSNQGLTISFNNQDPSINTNSRFFRKKKGSKLIDFHDSKVTILWDLSNARYETSTSPEPLQFYYVVVVVDSELGLILGDSETIATKMKDSIPMAKVSLLSRREYCSSAWRNKGNQTIFVDGLLVDLLWDVHDWFFNSSSSSGSSLSSGSGVFMFRTRSGLDSRLWLEEKNSHKDKDRIEFSFFIYASTLTCVYDSMAPPFSTSLILIQYKLLPATLWVHVLYMHILNK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00423 295 PANTHER EXPRESSED PROTEIN 175 254 IPR008586 -
Vifa6g00423 295 Pfam Plant protein of unknown function (DUF868) 40 173 IPR008586 -
Vifa6g00423 295 Pfam Plant protein of unknown function (DUF868) 175 253 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00423 Vifa-Chr6 166912722 166914859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00423 1 253 EF-hand Containing Proteins AT3G04860 27.778 3.16e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00423 - - gmx:100794621 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02352 1 378268487 378269428 Vifa6g00423 6 166912722 166914859 PCT