Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02352 ATGAATGTCTCAAACATAATTTCATGTTTCAATGAGAATGCTGTGAATGTGTCACATTCCTCATCATCATGTTCTAGCTATTCAAACAAGTCTTGTATATCTCAAAACCTCACACCTTCAACACAAAACTCAGTCTCATCAATCTACAAAGCAATCCTCTCCAACAAAAAACAGATGTTGATCACAGTTACTTGGAGTAAAAGCCACTCAAATCAAGGACTCACAATAGTCTTCAATGAAGAAGAAGATCCACTGGCTGCAAGAGTTTTCAGACTCAACACAAACTCAAGGCTTTTCAGAAGGAAAAAAGGAAGCAAGTTGGTTGAAGTGGAACATATTCATCATGGATATCCAAAAGTTGAAGTCTTTTGGGATCTTTCAAATGCAAAATATGAAACTAGTCCTGAACCTGTTGATGGATTTTATCTAACAGTTTTAGTTGATTCAGAAATTGTGATTATTCTAGGTGACAAAGTTGAAGAAAACTTAACAAAGAAGCTGAAAAAAAGAACTTTTTTAGGCAAAGTTTCACTTTTTTCAAGAAGTGAATATTTTTCAGGTAACACAGTTCATTACACAAGTAAGACTAAGTTCTGTGAAAGTGGAACGTTTCATGATATTTTGATTAGATACAGTGGTGAAAATGAAGGGTTTAAATCACCTGTTTTGAATGTTTACATTGATAAGAAGATTGTGATTTGTGTGAAGAGGTTGAAGTGGAATTTTAGAGGGAATGAAACTATTTTTGTGGATGGATTGTGTGTGGATTTTCTTTGGGATGTTCATAATTGGTTTTTTAGAGGTGTTTCTGGTTATGCTGTGTTTATGTTTAGGACTAGGAGTGGTTTGGATAATAGGTTGTGGTTAGAGGAAAAATTGGATGTGAAAAATATAAATAGAGATGAGTTTTCATTGTTGATCTATGCTTGTAAAACTACATAA 942 0.3355 MNVSNIISCFNENAVNVSHSSSSCSSYSNKSCISQNLTPSTQNSVSSIYKAILSNKKQMLITVTWSKSHSNQGLTIVFNEEEDPLAARVFRLNTNSRLFRRKKGSKLVEVEHIHHGYPKVEVFWDLSNAKYETSPEPVDGFYLTVLVDSEIVIILGDKVEENLTKKLKKRTFLGKVSLFSRSEYFSGNTVHYTSKTKFCESGTFHDILIRYSGENEGFKSPVLNVYIDKKIVICVKRLKWNFRGNETIFVDGLCVDFLWDVHNWFFRGVSGYAVFMFRTRSGLDNRLWLEEKLDVKNINRDEFSLLIYACKTT 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02352 313 PANTHER EXPRESSED PROTEIN 6 311 IPR008586 -
Vifa1g02352 313 Pfam Plant protein of unknown function (DUF868) 40 311 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02352 Vifa-Chr1 378268487 378269428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02352 8 312 EF-hand Containing Proteins AT5G28150 36.688 5.79e-50 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02352 - - gmx:100798692 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02352 1 378268487 378269428 Vifa1g02352 1 378268487 378269428 ECH
Vifa1g02352 1 378268487 378269428 Vifa6g00423 6 166912722 166914859 PCT