Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00362 ATGTCCACCAAAGAATGCGGCCACCACGACGACGAACACCGCCGAAAACTCCTCCGCTTAATAATCGCCGGGATAGCATCACTAATCTTGGTAATACTCCTAACCATCTTCATAATATACCTCATCCTCAAACCAACAAAACCACAGTTCATAATCCAAGACGCAACAATCTACAATTTCAACATCTCTTCTCCAACTTCCTCACCTTTTCCCACACCCAACACACTCTCCCTCACAATGCAAGTCACACTCTCCACTCACAACCCTAACAACAAAATCGGAATCTACTATCAAAACCTTCACGTCTACGCTTCCTACCAAACCCAGCAGATCTCATTTCCATCTGCACTTCCGGATACTTACCAAGGGCATAACGATTTCACAGTTTGGTCGCCGTTTATCTACGCTGTTGCCGTTCCGGTTTCGCCTTTTACATTCAGCGCTTTGCAGCAGGATGAGAATAACGGAATGGTGTTGCTTAGTGTTAAAGTTAATGGAAGGGTTAAGTGGAAGGTTGGGAGTTGGATCTCTGGGAGGTACCATATTTTTGTTAACTGTCCTGCTTATGTTAGGTTCGTCGGTGATCGGAATAATGGTGTCGGAGTTCTTGCTCCGGCGGTTAAGTTTCAGGTTTTGCAAAGTTGCACTGTTGATGTTTAG 660 0.45 MSTKECGHHDDEHRRKLLRLIIAGIASLILVILLTIFIIYLILKPTKPQFIIQDATIYNFNISSPTSSPFPTPNTLSLTMQVTLSTHNPNNKIGIYYQNLHVYASYQTQQISFPSALPDTYQGHNDFTVWSPFIYAVAVPVSPFTFSALQQDENNGMVLLSVKVNGRVKWKVGSWISGRYHIFVNCPAYVRFVGDRNNGVGVLAPAVKFQVLQSCTVDV 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00362 219 PANTHER OS05G0367900 PROTEIN 19 210 IPR044839 GO:0098542
Vifa6g00362 219 Pfam Late embryogenesis abundant protein 84 186 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00362 Vifa-Chr6 149438158 149438817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00362 19 186 EF-hand Containing Proteins AT5G21130 22.807 4.40e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00362 - - gmx:100812905 291.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02199 1 353495517 353496182 Vifa6g00362 6 149438158 149438817 PCT