Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00353 ATGGTGTCTCCAAACATAAACCAAGAGAAACCAAGTGTACTAGTTAGAGGATTGGAAAAGATAATAATTTTACCAAAGGTTGTAATGAAGAAGGTGTTATGCATTTGTAAGATGTCAAAGGAGATAGCACAAGATGATCCAAGAAAAGTGATTCATTCACTAAAAGTTGGACTTGCAATCTCTTTGGTGTCTCTATTTTACTACTATCAACCCCTTTATGAGAACTTTGGTCTTTCAGCAATGTGGGCTGTGATGACTGTTGTGGTAGTCTTTGAATACACAGTTGGAGCTACCTTAGGTAAAGGTTTGAATAGGACAATGGCAACATTGGCAGCTGGTGCTTTAGGTGTTGGTGCTCATTACTTAGCTAGCTTATCAGGAGAGACAGGAGAACCTATTCTAATTGGATTCTTTGTATTCCTACAAGCTGCTATAGCATCATTCATTAGGTTCTTTCCAAAAGTGAAAACAAGATATGATTATGGGATGTTAATATTTATCTTGACATTCTCTTTGATATCTGTATCTGGATTTCGTGACGATGAAGTAGTCAAAATGGCTCACAAAAGATTATCTACTATCTTTCTTGGAGGTTCTGCTTGTGTGATGATTTCTATTTTTGTTTGTCCTGTTTGGGCTGGTGAAGAATTGCACTATTCAATTGCTCAAAAGTTGGAAACACTTGGTGACTTCTTAGAAGCATTTGTTGGTGAGTACTTCAAAACAACAAAGGAAGAAGAATCTAAAGAGAAAAAGTCTTTTCTTGAAGGTTATAAAAGCATTCTCAATGCTAAAAGTAGTGAAGAGTCTTTGGCCAATTTTGCAAGGTGGGAACCAGGTCATGGAAAGTTCAAATTTCGTCATCCATGGAGTCAATATCTTAAAATCGGTGCACTTTCTCGTCAATGTGCTTATCGAATGGAAGCTCTAAAGGAACAACTCAACTCCGATATTAAAGGATTGACCGAAATCCGGGGTACAATCCAAGAACTATGCACAGAAATGTGTTTAGAATCAAGCATGGCATTGAAACAATTGAGTTTATCAATCAAAACAATGACAAAGAAATCATCACATGATACACACATTGCAAACTCGAAAGCCGCGGTGAAAAGCCTGAATTCATTGCTTCAATCAAGTTTATGGAAAGAAACAGAACTTTTATCAGTTATACCAATTGTGACAGTGGCTTCACTACTGATTGATGTTGTTGGTTGCACAGATGAAATTGCAGATTCTGTTAATGTTCTTGCTACAATGATAAATTTTGATACTTTGGATGATGAAAAAAATACTAAAGAAGTCTCACAATCTCCAACTTGTGAATGTGTTAAACCTAATCCCATGATTGAGAACTCACATGTGGTTATTATAGCTGAGGATTCAATGTGCGATAAATGTAACAAAGTTTGA 1413 0.3623 MVSPNINQEKPSVLVRGLEKIIILPKVVMKKVLCICKMSKEIAQDDPRKVIHSLKVGLAISLVSLFYYYQPLYENFGLSAMWAVMTVVVVFEYTVGATLGKGLNRTMATLAAGALGVGAHYLASLSGETGEPILIGFFVFLQAAIASFIRFFPKVKTRYDYGMLIFILTFSLISVSGFRDDEVVKMAHKRLSTIFLGGSACVMISIFVCPVWAGEELHYSIAQKLETLGDFLEAFVGEYFKTTKEEESKEKKSFLEGYKSILNAKSSEESLANFARWEPGHGKFKFRHPWSQYLKIGALSRQCAYRMEALKEQLNSDIKGLTEIRGTIQELCTEMCLESSMALKQLSLSIKTMTKKSSHDTHIANSKAAVKSLNSLLQSSLWKETELLSVIPIVTVASLLIDVVGCTDEIADSVNVLATMINFDTLDDEKNTKEVSQSPTCECVKPNPMIENSHVVIIAEDSMCDKCNKV 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00353 470 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 26 429 - -
Vifa6g00353 470 Pfam Aluminium activated malate transporter 41 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00353 Vifa-Chr6 146079764 146082254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00353 29 419 Miscellaneous Gene Families AT1G08440 57.360 5.02e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00353 K25841 - gmx:100816113 655.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02176 1 349511137 349513079 Vifa6g00353 6 146079764 146082254 PCT