Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00197 ATGGTTGGAGATTTGTCCTACATGCATCCCGAACTTCTTCAGTCTTTCCTTGCTGGTGAAGCAGCATCGGGCGCGCTAACATCTGGTTTGAGGTTGATTACAAAAGCTGCATTTGAAAATTCTCAGAACGGTCTTCGCAAAGGAGCAATTCTGTTCTTTTCTATATCAACATTCTTTGTGCTTCTTTGTCTTGTTCTCTATGGATTTGTGTTTCCTAAATTACCAATTGTCAAGTACTACCGATCAAAAGCAGCATCCGAAGGGTCCAAAACGGTTTCATCTGACCTTGCTGCAGCCGGAATCCGTTCTGAAACCGAAGAATCAAGACAATTTGAGCGCAAAGAAAATAAAGAATTGTTATTGGAAAACATTGATTATGCACTTAATTTGTTTACGATATATGTCTTGACATTGTCTATATTTCCTGGATTCTTATCTGAAGATACCGGAAAACACAGTTTAGGCACATGGTATGCTCTTGTTCTAATAACTATGTACAATGTGTCGGATCTTATAGGAAGATACATTCCACTGATTAAAATCCTGAAGTTGGAGTCGAGAAAGCTGATCACTACAGCATCCGTTTCTCGGTTTTTATTTATTCCTGCATTTTATTTCACTGCAAAATATGGTACTCAGGGTTGGATGATAATGTTGACATCTTTGTTGGGATTGTCAAACGGTTACCTCACTGTTTGTGTTTTCACTTCTGCACCAAAAGGTTACAAGGGACCTGAACAAAATGCGTTGGGAAATCTCTTGGTATTGTTTATTCTTGGAGGTATTTTTGCTGGGGTAACACTTGACTGGTTGTGGTTAATAGGCAAAGGATGGTGA 837 0.3907 MVGDLSYMHPELLQSFLAGEAASGALTSGLRLITKAAFENSQNGLRKGAILFFSISTFFVLLCLVLYGFVFPKLPIVKYYRSKAASEGSKTVSSDLAAAGIRSETEESRQFERKENKELLLENIDYALNLFTIYVLTLSIFPGFLSEDTGKHSLGTWYALVLITMYNVSDLIGRYIPLIKILKLESRKLITTASVSRFLFIPAFYFTAKYGTQGWMIMLTSLLGLSNGYLTVCVFTSAPKGYKGPEQNALGNLLVLFILGGIFAGVTLDWLWLIGKGW 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00197 278 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 1 272 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa6g00197 278 Pfam Nucleoside transporter 3 272 IPR002259 GO:0005337|GO:0016020|GO:1901642
Vifa6g00197 278 SUPERFAMILY MFS general substrate transporter 48 271 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00197 Vifa-Chr6 84688219 84689529 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g00197 1 276 Organic Solute Cotransporters AT4G05120 72.043 3.87e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00197 K15014 - gmx:100784933 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00197 6 84688219 84689529 Vifa6g00197 6 84688219 84689529 ECH
Vifa1g01833 1 297909025 297916053 Vifa6g00197 6 84688219 84689529 PCT