Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g00195 ATGCAATCATTCACTTCCATTCTCGCGTGCTCACTACTTCTCCTACTCCCACCCTTCTCTCTTGCCGGTTTATTATCCCAACCGGTAACCGACCCCAACCAGCCTCTCAAACCGGGCGAATACCCTTCCTCCAACACCGTCCCAGCATTCCCGGTTCAAACCCAAACTCAAATCTGCAAACTCGACTTATCCAACGAACTCTTCGGCGGAGTCAAAGACGCATGCGGAAAAGACCTAGACCGAAGCCGATGCTGCCCCGTCCTCGCAGCTTGGCTATTCGCCGCACACGCTCGCTCCGCCCTCGAAGTAACCGCCGACGCTCCAGCTCCCTCGAGCGGAGAACAACCGATGATGCCCGACGACTCACAGAAATGCGTTAACTCGTTGCAAGACTCTTTACTAACTCGTAACATTCGAATACCTCAACCTAACGCAACATGTGACGCGATTCTTTGCTTCTGTGGAATCAGGCTTCACCAAATAAGCTCCTTATCATGCCCCGCCGCGTTTAACGTTTCTGGTTCGCATAAAAACGCTACTCCCACCGCCGCCGTTCGTAACCTGGAAAATAACTGCCGTAACGCTTCTTATTCCGGTTGCACCAAATGCCTTTCTGCCCTACAAAAGGTCAAGAGTTTCAAGAACGGGACGAAAGGAGGGAGTGAAAGAGTGAAGAAGATGTTTAACCGAGACTGTGAACTGATGGGTTTGACGTGGTTACTTGCGAAGAACAAAACGACATACATACCTACCGTTTCAGCAGTTCTACGTGCCATGATGTACAGTGCTCACCCGCATGAATCAAAGTGTAGTCCTGATCAAGAGAACATGCCATTAGCCGTTGATTCTCTGCAATTTGAAACTGGTTATGCGCCATCTTGGCCGTCCAAATTATGGGTTACTGTTTTAAGTTTAATAATCTTGTTTTGTAACTTGTAA 939 0.4899 MQSFTSILACSLLLLLPPFSLAGLLSQPVTDPNQPLKPGEYPSSNTVPAFPVQTQTQICKLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVTADAPAPSSGEQPMMPDDSQKCVNSLQDSLLTRNIRIPQPNATCDAILCFCGIRLHQISSLSCPAAFNVSGSHKNATPTAAVRNLENNCRNASYSGCTKCLSALQKVKSFKNGTKGGSERVKKMFNRDCELMGLTWLLAKNKTTYIPTVSAVLRAMMYSAHPHESKCSPDQENMPLAVDSLQFETGYAPSWPSKLWVTVLSLIILFCNL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g00195 312 PANTHER GPI-ANCHORED PROTEIN 4 306 IPR040376 -
Vifa6g00195 312 Pfam SPARK 55 215 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g00195 Vifa-Chr6 82662713 82663816 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g00195 - - vra:106777532 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g00195 6 82662713 82663816 Vifa6g00195 6 82662713 82663816 ECH
Vifa1g01832 1 297634841 297635879 Vifa6g00195 6 82662713 82663816 PCT