Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01832 ATGCAATCATTAACTTCCTTTCTAGCTTTCTTCATTCTCTTAACATCATTATCACACCCTTCACATTCAAACACTGTCCCTTCATATCCCACTCCAACTCAACCCCAAATATGCAAACTAGACCTCTCCAACGAACTATTCGGCGGCGTAAACGTCGCATGCGGCAACAACCTCGACCGAAGCCGCTGTTGTCCCGTACTCGCTGCTTGGCTCTTCGCAGCTCACGCGCGAAGAGCCTTAGAGATTTCTCCTCCACCAACGGAAAATGCCATTGACCTTCCGAGGATGCCGGATGATTCGCAGAAGTGTGTTAACTCACTCCAAGACTCTCTTCGAAACAGAAACATCATAATCCCAACACCAAATGCTAGCTGTGATGCTGTGTTATGTTTCTGTGGAATCAGGCTTCATCAGATAAGCTCATTGAATTGTCCAACCGCTTTTAATGTTTCGGATTCGACTACTGTTCACAATGTATCTGGTTCTCATAAAGCTACTCCTACTGCTGCAGTTCGTGATTTGGAGAAGAATTGCCGTAACTCTTCTTATGCTGGCTGCACCAATTGTCTTGCTGCATTGCAAAAGTTAAACGTGCACAAGAAAGAGAGCAAGGAAAGTGACCGAGAGAGGAAAATGTTCAACCGGGACTGTCAACTGATGGCACTAACATGGCTATTGGGAAAGAACAAGACGTTGTATATACCAACAGTATCAGCGGTGTTACGTGCTATAATGTACAGTGCTCATCCACACGATATAATGTGTAGTCCAGACCAAGAGAACATGCCATTGGCCGTTGATTCGATGCAATTCGATCACACGAGTAGTAGTGAGGCACAATCTTGGCCGTTCATCAAGTTATTTTGGAGTATGATTGTTGTTATGATTGGAATTGTGGTGTTATGA 906 0.4448 MQSLTSFLAFFILLTSLSHPSHSNTVPSYPTPTQPQICKLDLSNELFGGVNVACGNNLDRSRCCPVLAAWLFAAHARRALEISPPPTENAIDLPRMPDDSQKCVNSLQDSLRNRNIIIPTPNASCDAVLCFCGIRLHQISSLNCPTAFNVSDSTTVHNVSGSHKATPTAAVRDLEKNCRNSSYAGCTNCLAALQKLNVHKKESKESDRERKMFNRDCQLMALTWLLGKNKTLYIPTVSAVLRAIMYSAHPHDIMCSPDQENMPLAVDSMQFDHTSSSEAQSWPFIKLFWSMIVVMIGIVVL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01832 301 PANTHER GPI-ANCHORED PROTEIN 21 295 IPR040376 -
Vifa1g01832 301 Pfam SPARK 34 206 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01832 Vifa-Chr1 297634841 297635879 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01832 - - gmx:100810917 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01832 1 297634841 297635879 Vifa1g01832 1 297634841 297635879 ECH
Vifa1g01832 1 297634841 297635879 Vifa6g00195 6 82662713 82663816 PCT