Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03532 ATGGGAAACCATTTCTCATTTTCTTCTACCATCAAAATCATTCACTATGATGGTTCAATTCAAGAGCTTGATCAACCAATAACAGTAGCAGAACTCATGTTAGATCATCCGAAACATGTAGTTGTCGAGTTTCATTCAGCTTTGAAGCAGAAAAAACCAACACCGTTACCGGCTGACAAGAATCTTGAGATGAACAAAAAGTATGTCATGGTTCCGGTGAAGCCAGGGAAGCCGGTTGGATTAAAGGCGGAAGATTGTCGTAGGATTCTTTCCATGGTTAATTCGTCTCTTGATTCTAGTAATTATCTCATGTGCTCTCAAGGCTTTGTTCCTTGGCTTGTAAAGTTTTTGAAGAAAAGGAATGAGGCTATTGGAGAGGTTGAGAAAAGTTTGGAGATAAATGGAGAAGAGAGGTTTGAGTTTTGTGAGGTTTTGCCGGAAATGATGGAAGAGAGAGGAGAGTATTTGAATTTGAGTAGGCAATTGTCTGGGAAAGGGTGGAAGCCTAGTTTGGATACTATTAAGGAAAAGAAGATTAAGAAAAAGGGATAA 552 0.3913 MGNHFSFSSTIKIIHYDGSIQELDQPITVAELMLDHPKHVVVEFHSALKQKKPTPLPADKNLEMNKKYVMVPVKPGKPVGLKAEDCRRILSMVNSSLDSSNYLMCSQGFVPWLVKFLKKRNEAIGEVEKSLEINGEERFEFCEVLPEMMEERGEYLNLSRQLSGKGWKPSLDTIKEKKIKKKG 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03532 183 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 8 176 - -
Vifa5g03532 183 Pfam PADRE domain 1 176 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03532 Vifa-Chr5 1154175257 1154176319 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03532 - - psat:127132622 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03532 5 1154175257 1154176319 Vifa5g03532 5 1154175257 1154176319 ECH
Vifa5g03532 5 1154175257 1154176319 Vifa3g02147 3 533175875 533176438 PCT