Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02147 ATGGGAAACCAAATGTCGTTTCGACCTTCAGATTCAAGAGGTAAAGTTGTTTTCTTAGATGGTTCAGTTCATGAATTCGAGGAACAGATAACCGCGGCCGAGCTAATGATGGATCATCCACAGAAAGTAGTAGTTGAGTTTCATTCAGCTGTGAGCCAGAAAAGGCCAGCACCATTGCCTGCTGACAAGAAGCTAGAGATGAATAAGATGTATCTGATGCTTCCGGTGAAGCAAGGGAAGGCTGTTGGTTTAAGCGGCGAGGAAACTCGGCGCGTTTTGTTGATGGTTAATTCTGTTTTGTGTTCTTCTAAGTTTTTTCCTTGGTTTAGTAGTTTATGTCATAGTAGTGAGATTGTGGAGCCGCGGAGAAAGGAGGAGGAGAAGGAGAAGGAGAAGGCAGAGATACGTGATTTTTCGGAGAATTTTCCGGAAATATTGGAAGGGAGGCCTGATTATTTGAATAGGCAGATTTCAGGGAAAGTATGGAAGCCTAGTTTGGATACTATTAAGGAGAAGAGTATTGAGAAAAAACATAGTCATTGGTTGTTTCTCAAGAGTTTTTAG 564 0.4202 MGNQMSFRPSDSRGKVVFLDGSVHEFEEQITAAELMMDHPQKVVVEFHSAVSQKRPAPLPADKKLEMNKMYLMLPVKQGKAVGLSGEETRRVLLMVNSVLCSSKFFPWFSSLCHSSEIVEPRRKEEEKEKEKAEIRDFSENFPEILEGRPDYLNRQISGKVWKPSLDTIKEKSIEKKHSHWLFLKSF 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02147 187 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 11 171 - -
Vifa3g02147 187 Pfam PADRE domain 1 171 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02147 Vifa-Chr3 533175875 533176438 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02147 - - gmx:100784884 226.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02147 3 533175875 533176438 Vifa3g02147 3 533175875 533176438 ECH
Vifa5g03532 5 1154175257 1154176319 Vifa3g02147 3 533175875 533176438 PCT