Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03529 ATGGATACGTATTTACATACTCGAATTTCTGGGATAGTTCCTTCTGTCACTGCTTTTACTGCAACTACTACTTCACGTGGCAACAATCACCTGCTTTCGAGATTCTCCTTTCCATTTCGAAAATCTCTGAACTCCCGACTCATCGAGAATTCCGGCGGAAACAACGGCCTCGGCATCGTCGACGATTCCGTTATGGAAGAGAATGTGGTTGTTGCGGAGACGGAAGGAGAGGGGAAGAATGCCAACTGGATTTTCAAGGTTTTTGAACTGAATTCTGTTTGGAGAGGAGAACAAGAGAGTGACGATGATGACGATGAAGACTGTGGTGTTTGTAGTGTTGATGAAGATCAAGATGAAGTTTCGTTTGATAGAGAGTCTTTTTCGAGAATGCTTCGTAGGGTAACCCTAGTTGAAGCAAGAATGTATGCGCACCTGTGTCACTTGGGGAATTTGGCATACTCTATTCCTAATATCAAGTCAGGAAACCTCTTGAAAAGACGTGGTCTGCGATTTGTAACTTCATCAATAGAGAAAAGGGAACTGGCTGCAACAGCTGATAAAAATCTGGCATCTGATGCAATTCAGAAAGAAGAGACCAGTGAAAAAGAAGCCGGAGAAAAAAATGATGAGTCGATGATAAATGCATCTTCTGCTTGTCAGATTTCGCTGGTTGAAGGGTCACTTGAAGCAAGAAGAAGGAGCGTTGATACTGTGAACGTGATAAACACAAATGCTGGTTCTTTGATGGCAACAACTGATTCAATGTCAGCAGTAATTGTTACAGATGAGGAAGTAAAACAAGCTTTTGCCGGTGATTTGAATTCAACAAGTTCTACACCATGTGAATGGTACATATGTGACGATGACCAGAGTTCTACAAGATATTTTGTTATTCAGGGTTCAGAATCATTTGAGTCCTGGCAGGCAAACCTACTTTTTGAGCCAGTTCAGTTTGAGGAGCTTGATGTCCTTGTCCATAGGGGCATATATGAGGCTGCAAAAATGACATATCAGCAGATGTTACCTGAGGTTCATGCTCACCTAAAATCTCAAGGCTCTCGAGCAACTTTCCGTTTCACTGGCCATTCACTGGGAGGAAGCTTGGCATTACTTGTAAATCTTATGCTGTTGATAAGGAAGGAAGTGCCAGTTTCTTCTTTGCTTCCTGTGGTAACTTTTGGTTCCCCATCAATCATGTGTGGAGGCGATCGTCTGCTCGAAAAGCTAGGATTATCTCGGAGTCATGTTCAAGCAATTGCAATGCACAGAGACATAGTACCACGAGCGTTTTCTTGCAAGTACCCTAATCATGTCACCGAACTATTAAAGGCCGTTAATGCAAGCTTTCGCTGTCATCCTTGCCTTAATAACAAAAAGCTACTATATGCACCGATGGGTGAGTTATTGATTCTACAGCCAGACGGGAAATTTTCACCTAGCCATGATCTCCTGCCACCAGGCAGTGGTCTATACCTTTTGACAGGCCCTCTTTCAGAATCCAGTGACACGGAACAACATATCCAAGCAGCTCAACTATTCTTCTTGAACTCCCCGCATCCACTCGAGATATTAGCTGACCGATCCGCCTACGGTTTTGGAGGAACCATACAGAGGGATCATGACATGAATTCATACTTGAAATCCATTAGAACCGTGATTCGTCAAGAACTTAGCCAAATCCGCACGGCGGCAAGGAGGGAGCTGAGACGAAAGGTACGGTCTCCTTTCGTGGCGCGACGTGTAAGCGATGCAGACATTGTTGATGGGAGGTCTATGGTAAGGGTCCGTATAATTCACGACCAGCCTCCCTTTTCAGGTATTATACAGAAACGTAGAAAGTCCTTGAAAAGGTTCAGTAGGCTTGTTGCATCTCAACATATGCAACTATTTGTAATGTTCTTGTTTGTTTCCGGCACGGTTGTTACTCTTGGAAACATGTAA 1941 0.4369 MDTYLHTRISGIVPSVTAFTATTTSRGNNHLLSRFSFPFRKSLNSRLIENSGGNNGLGIVDDSVMEENVVVAETEGEGKNANWIFKVFELNSVWRGEQESDDDDDEDCGVCSVDEDQDEVSFDRESFSRMLRRVTLVEARMYAHLCHLGNLAYSIPNIKSGNLLKRRGLRFVTSSIEKRELAATADKNLASDAIQKEETSEKEAGEKNDESMINASSACQISLVEGSLEARRRSVDTVNVINTNAGSLMATTDSMSAVIVTDEEVKQAFAGDLNSTSSTPCEWYICDDDQSSTRYFVIQGSESFESWQANLLFEPVQFEELDVLVHRGIYEAAKMTYQQMLPEVHAHLKSQGSRATFRFTGHSLGGSLALLVNLMLLIRKEVPVSSLLPVVTFGSPSIMCGGDRLLEKLGLSRSHVQAIAMHRDIVPRAFSCKYPNHVTELLKAVNASFRCHPCLNNKKLLYAPMGELLILQPDGKFSPSHDLLPPGSGLYLLTGPLSESSDTEQHIQAAQLFFLNSPHPLEILADRSAYGFGGTIQRDHDMNSYLKSIRTVIRQELSQIRTAARRELRRKVRSPFVARRVSDADIVDGRSMVRVRIIHDQPPFSGIIQKRRKSLKRFSRLVASQHMQLFVMFLFVSGTVVTLGNM 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03529 646 SUPERFAMILY alpha/beta-Hydrolases 277 461 IPR029058 -
Vifa5g03529 646 MobiDBLite consensus disorder prediction 192 211 - -
Vifa5g03529 646 CDD Lipase_3 279 428 - -
Vifa5g03529 646 Gene3D alpha/beta hydrolase 237 459 IPR029058 -
Vifa5g03529 646 MobiDBLite consensus disorder prediction 192 209 - -
Vifa5g03529 646 Pfam Lipase (class 3) 296 432 IPR002921 GO:0006629
Vifa5g03529 646 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 33 638 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03529 Vifa-Chr5 1152781251 1152784370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03529 1 635 Acyl Lipid Metabolism Gene Families AT1G02660 50.141 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03529 - - psat:127132626 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03529 5 1152781251 1152784370 Vifa5g03529 5 1152781251 1152784370 ECH
Vifa5g03529 5 1152781251 1152784370 Vifa3g02153 3 534684328 534687479 PCT