Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02153 ATGGAAACTATGTGTTTAAAACCTGGGATAGTTCCCTCGATCTCCATTGCCGGATCGTTAGATACACGCGTTTCTCCGTCTCAGGTTAGTGCGGTGGGTCGTTCCGCCGTGGAGAAACCGTCGCGAAATTCGTTATTTTCTAGATTCTCATTTCGATACCCTCTGGATTCGTTATGGCCGGGAAAACGGAGTTGTTCTGGGAATAGGACGTTTAGTGGTTTGTCTATTGATGAATCTGTTATGGCGGAGAACGGAGAGGATGAAGGAGAGACGGAGTCTGTTAAAGATGAGGGGGAGGATGGAAGCGTGAATGGCGGGGAGGGGCGGAGAGAGAATTGGGTTTTGAAGATTTTGCATGTGAAGTCTGTGTGGAAAGGGGAACGAGGGAATGAGAGGGAAGGAACCGAGAACGGTGAAAACAATGGTGGTGGTGATGATGAAGTTTGTGATGGTTGTGCGGTTGAGAATGATGATGACGAAAAAGGAGAGGATTTTGAATTTGATAGAGGGTCGTTTTCGAAAATGTTGAGGAGGGTGTCTTTGGCTGAAGCTAGGTTGTATGCGCAGATGTCACACTTGGGGAGTTTGGCTTATTCTATACCCAATATTAAGCCAGGGAAACTCTTAAAACATTACGGTCTGCGTTTTGTAACTTCATCGCTAGAGAAAAAGGAATTGGCAGCAAAATCTGAGAAAAATCCTGAGGAAGTTGAAAGTCAAGAGAAGCAAGAAGAAACAAAGGAGCCAAATAATGGTGGATATAGGATAAGTGCGTCGGCTGCTTATAATATTGCTGCCTCCGCTGCTTCTTATCTGCACGCTCAGACAAAGAGCATACTTCCGTTCCAATCTTCAAATACGGCTGCTGGTGAAGGAAGCAATGAAAGTCTTAACATGACGAACGCAGAGGTGGCATCTTTGATGGCGACTACTGATTCAGTGACAGCAGTAGTTGCAGCAAAAGAGGAAGCAAAACAAGCTGTTGCAGATGATCTTAACTCAACTCGCTCATCACCTTGTGAATGGTTCATCTGCGATGACAACCAGAGTGGTACAAGATTTTTTGTTATTCAGGGTTCTGAGTCATTAGCATCTTGGCAAGCAAACCTACTTTTTGAGCCAATTAAATTTGAGGGTTTGGATGTCCTAGTTCACAGGGGTATTTATGAGGCTGCTAAAGGGATATATCAACAGATGCTGCCGGAAGTTCACGCACACCTAAAATCCCGAGGTTCTCGTGCAAATTTTCGATTCACTGGACATTCACTTGGTGGAAGCCTGGCATTACTTGTAAATCTCATGCTGTTCATAAGACAAGAAATACCTATCTCCTCTTTACTCCCTGTGATAACATTTGGTTCCCCTTCCATCATGTGTGGAGGTGACACTTTACTAGAAAAACTCGGTCTTCCGCGAAGTCATGTTCAGGCAATTATAATGCACAGAGACATCGTACCACGTGCGTTCTCTTGTAATTATCCTGACCATGTTGCGAAAATCTTAAAGGCTATCAATGCGAACTTTCGGAATCACCCGTGTCTCAATAACCAAAAGCTACTCTATACTCCAATGGGTGAATTATTGATTCTACAACCAAATGAGAAATTTTCACCAAGCCACCAGCTGCTGCCACAAGGCAGTGGTTTATATCTTCTGTGCTGTCCTCTGTCAGAACCTGATGACACGGAGAAGCAGCTCCAAGCCGCGCAACTGATGTTCTTGAACACACCTCATCCACTTGAGATATTAAGCGACAGATCCGCATACGGATCTGGAGGAAGCATACAAAGAGATCATGACATGAATTCCTACTTAAAGACCGTGAGAAGCGTGATTCGCCAAGAACTTAACCAAATCCGCAAATCAATGCGAGAGAAAAGACGCAAGGTATGGTGGCCGCTTGTATTACCACGACGAGTGGATACCAACATTGTTGTTGGGAAGTCTGTCGTATCGATCAATATCGGTCAACGCCAGGCACCGTTCTCTGGCATAATGAAGACAGGAAAAGAGTCCTTGAAAAGGTTTAGCAGGCTTATTGCATCTCAACACATGCAGTTGTTTGTGTTGCTTTTTTTCCCTGCTAGGATGTTAATCTTAGGTGCATATAGCTTAATTAGCATTCGATGA 2130 0.4437 METMCLKPGIVPSISIAGSLDTRVSPSQVSAVGRSAVEKPSRNSLFSRFSFRYPLDSLWPGKRSCSGNRTFSGLSIDESVMAENGEDEGETESVKDEGEDGSVNGGEGRRENWVLKILHVKSVWKGERGNEREGTENGENNGGGDDEVCDGCAVENDDDEKGEDFEFDRGSFSKMLRRVSLAEARLYAQMSHLGSLAYSIPNIKPGKLLKHYGLRFVTSSLEKKELAAKSEKNPEEVESQEKQEETKEPNNGGYRISASAAYNIAASAASYLHAQTKSILPFQSSNTAAGEGSNESLNMTNAEVASLMATTDSVTAVVAAKEEAKQAVADDLNSTRSSPCEWFICDDNQSGTRFFVIQGSESLASWQANLLFEPIKFEGLDVLVHRGIYEAAKGIYQQMLPEVHAHLKSRGSRANFRFTGHSLGGSLALLVNLMLFIRQEIPISSLLPVITFGSPSIMCGGDTLLEKLGLPRSHVQAIIMHRDIVPRAFSCNYPDHVAKILKAINANFRNHPCLNNQKLLYTPMGELLILQPNEKFSPSHQLLPQGSGLYLLCCPLSEPDDTEKQLQAAQLMFLNTPHPLEILSDRSAYGSGGSIQRDHDMNSYLKTVRSVIRQELNQIRKSMREKRRKVWWPLVLPRRVDTNIVVGKSVVSINIGQRQAPFSGIMKTGKESLKRFSRLIASQHMQLFVLLFFPARMLILGAYSLISIR 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02153 709 CDD Lipase_3 336 496 - -
Vifa3g02153 709 MobiDBLite consensus disorder prediction 225 249 - -
Vifa3g02153 709 Pfam Lipase (class 3) 355 492 IPR002921 GO:0006629
Vifa3g02153 709 Gene3D alpha/beta hydrolase 291 522 IPR029058 -
Vifa3g02153 709 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 26 698 IPR043367 GO:0008970
Vifa3g02153 709 MobiDBLite consensus disorder prediction 81 95 - -
Vifa3g02153 709 MobiDBLite consensus disorder prediction 225 253 - -
Vifa3g02153 709 MobiDBLite consensus disorder prediction 76 107 - -
Vifa3g02153 709 MobiDBLite consensus disorder prediction 127 152 - -
Vifa3g02153 709 SUPERFAMILY alpha/beta-Hydrolases 338 524 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02153 Vifa-Chr3 534684328 534687479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02153 1 709 Acyl Lipid Metabolism Gene Families AT1G02660 55.000 0.0 737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02153 - - gmx:100807834 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02153 3 534684328 534687479 Vifa3g02153 3 534684328 534687479 ECH
Vifa5g03529 5 1152781251 1152784370 Vifa3g02153 3 534684328 534687479 PCT