Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03353 ATGGATTCTGAGAATGAGGTTGCTCTGGAGGAAGAGAAGCGTGTACTTGGTGTGACAGATAAGAAGGATATAAACAAAGAAGATGCAAACGTTTGCGGTGAAGAAGTTCATAATGAGAATGAAGCGTCTAAGATTGAAAGCCATGTTTCTAGTAATGACACCGTTGAATCTGAAGCCTTAAAACATCCTAAGGAAACAAATAGTAGAGAAAGTGTAGCTTCCAAGAATAACAAATTTGTCAAAGTTAAGTCCAATTTGAAGGGAACAACTTCAACATCTAGAAAACAAAGGCCAACACTTTCTCAGAGTTTTTCCTTCCCAGCCAAATCAACTGGTGAAGATTCTATGCAGAAAAGCATTGATGGTTCTCTTTTTAAAACCAAAGTTAAAGCCTCCAATCTTCACCATTCAAGCAAGTCTTCAAACTCTGAAGGGAAGTCAAATGAGGCAAAAACAAACACTGAAGGTTGTAACAAGAGGACTACTTTGTCATCCATACCTGGTTTGAAATCGGTGTTTGGAAGGTCTACTTCACTTGGTGCAGTCCACAAGAGTCACACATCTGAGGCATCCATACCTGTTGATCAGAGAAACATATGTTCTGGATTTTCATCTAGATTGGAAGTAAGAGCTGAAAAGAGGAAGGAGTTTTTCTCTAAGTTGGAGGAAAAAGTTCAAGCCAAGGAAGCAGAAAAATCCAATCAACAAGTCAAATCAAAGGAAAACCAAGAGGCAGAGATCAAACAATTGAGAAAGAGTTTGAGTTTCAAAGCCACTCTAATGCCAAATTTCTATAAGGAACCACCTCCAAAACTTGAGCTAAAGAAGATACCAACAACCCGGCCAAGATCTCCAAAGCTTGGAAGGAACAAAGAGTCTTCTTATTCAAGTGCACGTGGGAATCAACAGCAGAATGATTCAGACAAGGCAAAGATCATAAAGGGTCATAAAGATGTGATTTCGAAGAAACCAATCATGAAAAATCAAGATAAAGTGAAGTGTCAAGAAAATGAAACCAAAGGAAGCAATGAAGAATGCACAAATGACATGGAGCAACAGTCTGAGACAGATCATTCTGCAAATGATCAAACTCTGTCTATAAATTCTACTACACCTGAGATTGTGTCACATGATGCTACGGTTGGAGTTTAG 1152 0.3863 MDSENEVALEEEKRVLGVTDKKDINKEDANVCGEEVHNENEASKIESHVSSNDTVESEALKHPKETNSRESVASKNNKFVKVKSNLKGTTSTSRKQRPTLSQSFSFPAKSTGEDSMQKSIDGSLFKTKVKASNLHHSSKSSNSEGKSNEAKTNTEGCNKRTTLSSIPGLKSVFGRSTSLGAVHKSHTSEASIPVDQRNICSGFSSRLEVRAEKRKEFFSKLEEKVQAKEAEKSNQQVKSKENQEAEIKQLRKSLSFKATLMPNFYKEPPPKLELKKIPTTRPRSPKLGRNKESSYSSARGNQQQNDSDKAKIIKGHKDVISKKPIMKNQDKVKCQENETKGSNEECTNDMEQQSETDHSANDQTLSINSTTPEIVSHDATVGV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03353 383 Coils Coil 218 253 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 72 122 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 309 356 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 269 288 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 289 308 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 7 46 - -
Vifa5g03353 383 PANTHER PROTEIN WVD2-LIKE 3 19 361 IPR044806 GO:0000226|GO:0008017
Vifa5g03353 383 MobiDBLite consensus disorder prediction 55 71 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 357 376 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 259 383 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 226 246 - -
Vifa5g03353 383 Pfam Targeting protein for Xklp2 (TPX2) domain 206 271 IPR027329 -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 130 163 - -
Vifa5g03353 383 MobiDBLite consensus disorder prediction 1 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03353 Vifa-Chr5 1106316768 1106318989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03353 - - psat:127125509 581.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03353 5 1106316768 1106318989 Vifa3g00722 3 155007226 155009154 PCT