Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00722 ATGGAATCGGATAATGGCGTTGTTGTGGAAGACGAAAAACATGTTATTGGAGAAATAACTAAGGAGAACATACATATAGAAATTGAAGAAAATTTTAATGCAGAAACTAAGACCAAGAATGAAGTATCTCAACCAGTAGTAGTATCTGAAGGCAGCAATTCTGTGGTTATTAAAAACTCCGAACTTGCTAAGGAACTTGGTGTCAAAAGTGGTGTGGCTTCAAAGAACACTAAATCTACAGCCAAAGATAAACTGAATTTGAAGGCCGCGACTTCATCGTCTCAAAGACAACAAAACCTTTCCAAGAGCCTTACTTTTCCATCAAAATCGGCTCGTGTTGAAGCGATGAAGAAAAGCACGGATGGAATTCTTTGGAAGACAGAAAATAAACATGCTCAAGCTGTGGCTTCAACTCTTCATTCCAAAAGGTTGACAAACTCAAAAGTGAACACAAAAGAAGCAATAAAAAGCCATGGAAATTCTAAAAGGACTTCTTTGACATCCATCAATAGCTTTAAAAGCGCTGAGAATTCAAACCCCGCGAAAAGTGAAAAACCAAATAAAGAAGACGACGATGCTCATTCGACAACTTCAAGTCTTACACCGTGTAGGAAGAGCAGTGGTTCGGGATTTTCCTTCCGACTGGAAGAACGAGCTGAAAAAAGAAAAGAGTTTTTCTCGAAGTTAGAAGAGAAAATTCAAGAAAAGGAAGCGGAGAAAAGTAATTTGCAAGAGAAATCAAAGGAAAGCCAGGAGGCAGAGATCAAGAAATTAAGAAAGAGGATGACATTCAAAGCAGCTCCAATGCCAAGTTTCTATAAGGAACCTCCTCCAAAAGTTGAACTCAAAAAGATACCTACAACACGCCCGAAATCGCCAAGGCTTGGAAGAAACAAAGGCCCTATTGTTAACAACAGTTCAGAAAAGAAATCTAGTTTGAGTTCACATGAGAAGCAACAGCAGAATGATTCAACTGTTGCAAAAGTAAAAGATTTTAAAGACGTGAGTTCAAAGAAACCGGTCAGAAAAACACAAGCCAAGGTACAATTACAGGAAATTGCAGTCACAAAAACAGAAATGGGTTCTGTCAAGACTATTATTACGAATGACGTTCCGGTAACCGGGCAAGATGCGAAAGTGGATATAGGAGAAGGCAATGAAGAAAGTAAAGATCCACCTCTGGACATTTCTGAATACCAAAATGAGATAGAGCTAGAGTCACTAAATGAACTTACTCAGAGCACTACACTGGTGAATGCATCTGCACCAGAAATTGTATCCTATGAAGTTACTGTTGGAGTGTAG 1305 0.3885 MESDNGVVVEDEKHVIGEITKENIHIEIEENFNAETKTKNEVSQPVVVSEGSNSVVIKNSELAKELGVKSGVASKNTKSTAKDKLNLKAATSSSQRQQNLSKSLTFPSKSARVEAMKKSTDGILWKTENKHAQAVASTLHSKRLTNSKVNTKEAIKSHGNSKRTSLTSINSFKSAENSNPAKSEKPNKEDDDAHSTTSSLTPCRKSSGSGFSFRLEERAEKRKEFFSKLEEKIQEKEAEKSNLQEKSKESQEAEIKKLRKRMTFKAAPMPSFYKEPPPKVELKKIPTTRPKSPRLGRNKGPIVNNSSEKKSSLSSHEKQQQNDSTVAKVKDFKDVSSKKPVRKTQAKVQLQEIAVTKTEMGSVKTIITNDVPVTGQDAKVDIGEGNEESKDPPLDISEYQNEIELESLNELTQSTTLVNASAPEIVSYEVTVGV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00722 434 MobiDBLite consensus disorder prediction 234 346 - -
Vifa3g00722 434 Pfam Targeting protein for Xklp2 (TPX2) domain 211 280 IPR027329 -
Vifa3g00722 434 MobiDBLite consensus disorder prediction 136 215 - -
Vifa3g00722 434 PANTHER PROTEIN WVD2-LIKE 4 75 372 IPR044833 GO:0008017
Vifa3g00722 434 Coils Coil 219 261 - -
Vifa3g00722 434 MobiDBLite consensus disorder prediction 323 341 - -
Vifa3g00722 434 MobiDBLite consensus disorder prediction 72 108 - -
Vifa3g00722 434 MobiDBLite consensus disorder prediction 234 261 - -
Vifa3g00722 434 MobiDBLite consensus disorder prediction 69 113 - -
Vifa3g00722 434 MobiDBLite consensus disorder prediction 136 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00722 Vifa-Chr3 155007226 155009154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00722 - - psat:127098237 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03353 5 1106316768 1106318989 Vifa3g00722 3 155007226 155009154 PCT