Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03347 ATGGAGAAAAGGAAAAATATTGTGCAGTATAGAGAGAGATTGGATAAGACTCTTGCCTCATTTGATCTTACAAATGATCAGAAACTTAGGTTGCTTGTGGAAAGTCAAGTTCGTCGTGATTCGCAATCAGAGATCGAATTGGAAGGTTATGCGGAGAAGCTGGAAATTAAGACTGCTGAGTTATCGAATTTTCTTGATATGGTGAGAAGTGCTTCTGCAGATGAAAATGGAGGGTCTAGTCCATCAGACACTGATTGGAAATTGAAACAGGATAACGAGGAGTTTCGCGTTATGTACCGCGTAGGACCAGAGGGAACTCCCTATCATACATTGCTGGTTGAAGGCTATGTAGATGGACCTGTTGATGTTTCTCTATGCCTCTCATGGGAATCAACCCTTTATAAGAAATGGTGGCCTCAGTTTACGATTCCGACTTTCAAAGTTACTGCATCTGATTGTTTACAGAAGGTGCAAACTGGTGAACAAATTGCGCTAGTAAGGATGAAGCCCCCATGGCCACTGTCTACAAGGGAGGCTATAGTTCATTATTATCTCTTTGAGTACTTTCAAGATGACTTGATAGTTGTTCTTTTGAAATCGGTCACGGAGCCGGAGAAAATTAATGACACTATTGATGGTTTCAACAAAGATGTGATTCCAGAAGCAAATGGTGTTGTGAGAATTGATTTGGTGGGAGGTTATGTTATACAAAAAGTGACTTCTGAAAGAAGTTATTTTCGGACCATAGCGAATTTGGATATCAAGGTGGATTTTATGCCTCCTTCCCTTGTAAATTTCATTTCAAGGCAACTTATCGGCAGCGGTTTCAGACTTTATCAGAAGGCTGTGGCCTCTATGATGAACAATGACAGAGAATTCAGCAAGGCCTTGACAGATTCATTGTATGTTAGAATTCGCGAAGCTCTATACAATACCCGTGAATCAAACTTTAAGGGCGAGGAGGAGCGTAAGCAAGTAGCGAGCATTCTTCCCGCTGAAGAACTTATTCAAAGTAAGCAAGATAGTGAAAATGGTATATCTCGGGAGGGTAGAAGAAGCAACCAAAATGAAAATAGTTATAACAGCGAGATTTTAGATGCTGGTAGCGAAGAGAGTGTACAAAGAGAGAAAGATATCAACAAACTACATGAAGTTCCAATGGAGGAAGGTGGCTCGTCTTTTGTACTAAAAGGCAATACGAATTGTGAGATTGTCGACGCAGATAGTGAAGAAATTATTGTGGAAGCAAATATTGACGAGATTGTACAAATCGAAAACAGTACGAATAAAGAACATGACATTTCAATTGAGTATGATGATACAAGAGATGTACAGAAAAGAAAGAGCAATGTATATATCAATTCAAATGTAAAACAGGCTTTAGAAACGTTAGAAAGGGCGATTTCAGCCGTTCGGAAATACGAATTTCCTTCGCGCAGATTCTCTTTTACCTTTGCTAATGAAGCAGCCGCCTGCAAACAAAAGGGAGATGAAGTTGATCAATATTCTGCAAAACTTTTTCAACCATCAGCGAAAAATGATATCGGTATACCACGCGAAAGCTCAGATGACCTCTATGAAATCCAAAACCTCAGGCACACCGGAACGGATCCAAACTTAAAGGAAGTAAATATTAACAAAGTAGTACTGGCTTTGCCGAATCAAAATCTCTTGAGACCGAATGAAGCGAGCCAGGTTGATTCATATTTGTTGAAAACTGAGACAACACTGGACCAGATTTTATGCGATAACAACGAATATACAGGACCAGATATGTCTTCAGATGATCCAATAAAATCAAACAGGCAGAAAAAAATAAACAACCTTGTAACTCAAGGTATCTCTTCAGATGTACCAAAAAAGTTAAACAAGAGGAAAAATTATAGATACTGCTGTTTTTCGCATTAG 1908 0.3915 MEKRKNIVQYRERLDKTLASFDLTNDQKLRLLVESQVRRDSQSEIELEGYAEKLEIKTAELSNFLDMVRSASADENGGSSPSDTDWKLKQDNEEFRVMYRVGPEGTPYHTLLVEGYVDGPVDVSLCLSWESTLYKKWWPQFTIPTFKVTASDCLQKVQTGEQIALVRMKPPWPLSTREAIVHYYLFEYFQDDLIVVLLKSVTEPEKINDTIDGFNKDVIPEANGVVRIDLVGGYVIQKVTSERSYFRTIANLDIKVDFMPPSLVNFISRQLIGSGFRLYQKAVASMMNNDREFSKALTDSLYVRIREALYNTRESNFKGEEERKQVASILPAEELIQSKQDSENGISREGRRSNQNENSYNSEILDAGSEESVQREKDINKLHEVPMEEGGSSFVLKGNTNCEIVDADSEEIIVEANIDEIVQIENSTNKEHDISIEYDDTRDVQKRKSNVYINSNVKQALETLERAISAVRKYEFPSRRFSFTFANEAAACKQKGDEVDQYSAKLFQPSAKNDIGIPRESSDDLYEIQNLRHTGTDPNLKEVNINKVVLALPNQNLLRPNEASQVDSYLLKTETTLDQILCDNNEYTGPDMSSDDPIKSNRQKKINNLVTQGISSDVPKKLNKRKNYRYCCFSH 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03347 635 MobiDBLite consensus disorder prediction 351 368 - -
Vifa5g03347 635 MobiDBLite consensus disorder prediction 338 373 - -
Vifa5g03347 635 SUPERFAMILY Bet v1-like 82 283 - -
Vifa5g03347 635 Gene3D - 84 291 IPR023393 -
Vifa5g03347 635 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03347 Vifa-Chr5 1105287612 1105290493 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03347 - - psat:127125513 1095.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03347 5 1105287612 1105290493 Vifa3g00729 3 155846171 155849976 PCT