Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00729 ATGGAGAAAAAACGGAAGATAGTGCAGTATAGGGAGAGGCTGGATAGGACTCTTGCTTTACCTGATCTTACAAATGTTGAGATGCTCAAAAATCTTGTTAAAAGTCAACTCATACCTTTATCAGAACAAGAAGATGAAGGATATAAAGAGAAATTAATAGAACATAAGACTGCAGGGATATCTAACTTTCTTGATATGTTGAGGAGTGCTTCAGCGGATCATGGAAGGTCCAATACTTCACATAATGATTGGAAATTAAAACAGGATAGTGACGAGTTTCGTGTTATGTATCGTCAAGGACTGGAGGGAACTCCCTTTCATACGATGCTGGTGGAAGGCTTTGTGGATGGACCTATTGATGTTTGTTTATGTATCTCATGGCAAACCTCTCTTTATAAAAAATGGTGGCCTCAGTCTACTATTCCTACTTTCAAAATCTTATCATGTGAATGTTTAGAGCAGGCCCAGATTGGGGAACAGATATCACTAGTGAGGATGAAGGTTTCGTGGCCTCTGTCTATGAGGGAAGCTGTAGTACACTATTATCTGTTTGAGTACTTTCAAGAGGACTTGGTTGTTGTTCTTACGAATTCGGTTCCTGATTCGAGTGTCGCGGGGACCCTTTATGGTTTCAATGAGGAAGCAATTCCTGAAGCAAAGGACGTCGTGAGAGTTGATTTAGTGGGAGGGTTTGCTTTGCAAAAGTGTACATCCGAAAGAAGCTACTTTCGGACAATAGCAAATATGGATGTAAAGGTTGATTTTGTTCCTCCGTCTTTGATAAACTTTATTTCAAGGCAGCTCATTGGCAATGGTTTCAGGCTTTATCAAAAGGTTGTGGCATCTGTGATGAGCCAAGATAAAGAAGAATTCAGCAAGGCCTTGGGGGATCCATTGTATGCTAGAATCCGCGAGGCTCTATATAGCGCGAGTAGCGGGGAGCTTGCGCAAGTTGCAAGAATTCACCCTGCTGAAGATCTTGTTGAAAGTAAGAAGGGTGAAGTAAAAGATGCAAATAATGTCGTGTCATCAGCAACGAATGCAACAGTACTACAGAATAGTGAAACAATTGGTGAGATTGTAGAATTAGGTAAGGAAGAGATTGTACAAAGTGCCGAGAACGATGTGAAAGTAAATGACATTCCAAATGACAGAGTTAGTGGAGTTGTACAAAAAGGCAAGAGGAGTGTGTATATCCGCTCAGAGGTGGAACAGGCTCTAGAAACATTAGACAAGGCCATTTCAATGGTTAGGGAATACCGATTACGTTCCCCGATTGCGACTTCTAGCTTTGCCAATGAAGAGTCTCCTTGCATGAAAAAATATGGTAGAGTTGATTCATTTTCCATAAAAACTGTTAAACCTTGTGATAACAATGAGGTTAGTGTTGGTTCATATTCTTTGGAAAATGGAGCAATTCTGGACCAAGCAACACGCGGCAACAAGCAACTAAATGCTGATTTGGTTCAAGACATCTCTTCAGATGACAAAGCCAAGTCCAGAAGGAAGAAAAAAAGTAACGCCGTTGTAAATCAAGGTATGTCTTCAAATAAACCAAAGAAGTTGAGCAGGCATAGAAGATATTTGTGCTGTAGTTTTCCGCATTAA 1608 0.4049 MEKKRKIVQYRERLDRTLALPDLTNVEMLKNLVKSQLIPLSEQEDEGYKEKLIEHKTAGISNFLDMLRSASADHGRSNTSHNDWKLKQDSDEFRVMYRQGLEGTPFHTMLVEGFVDGPIDVCLCISWQTSLYKKWWPQSTIPTFKILSCECLEQAQIGEQISLVRMKVSWPLSMREAVVHYYLFEYFQEDLVVVLTNSVPDSSVAGTLYGFNEEAIPEAKDVVRVDLVGGFALQKCTSERSYFRTIANMDVKVDFVPPSLINFISRQLIGNGFRLYQKVVASVMSQDKEEFSKALGDPLYARIREALYSASSGELAQVARIHPAEDLVESKKGEVKDANNVVSSATNATVLQNSETIGEIVELGKEEIVQSAENDVKVNDIPNDRVSGVVQKGKRSVYIRSEVEQALETLDKAISMVREYRLRSPIATSSFANEESPCMKKYGRVDSFSIKTVKPCDNNEVSVGSYSLENGAILDQATRGNKQLNADLVQDISSDDKAKSRRKKKSNAVVNQGMSSNKPKKLSRHRRYLCCSFPH 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00729 535 PANTHER POLYKETIDE CYCLASE/DEHYDRASE/LIPID TRANSPORT SUPERFAMILY PROTEIN 1 511 - -
Vifa3g00729 535 MobiDBLite consensus disorder prediction 492 523 - -
Vifa3g00729 535 Gene3D - 81 289 IPR023393 -
Vifa3g00729 535 SUPERFAMILY Bet v1-like 79 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00729 Vifa-Chr3 155846171 155849976 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00729 - - psat:127085934 929.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03347 5 1105287612 1105290493 Vifa3g00729 3 155846171 155849976 PCT