Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03205 ATGGATTTATTTCCCTTTATCCTCTCTTTCATTTTTATCATTCTACATCTCTCAGGACAAAGAGTTGTACGAGGTGAGGATGATATTCAACATCATCATCATAAAGAACCTATAACAAAGTTGTTTGTGTTTGGAGATTCATATGTTGACACAGGTAACATTAACAAAAAAGGTTTTGCTCCTTCATGGAAACAACCTTACGGTATCACCTTTCCCGGCAAACCCTCCGGTCGTTTCTCTGACGGAAGAGTCCTTACCGACTACATTGCGGAGTATTTGAATGTGAAATTACCAGCATCATATAGTAAAAGAGAACATGTCGCACCACATCAATTAAAAAATGGGATGAGCTTTGCATTTTGTGGTACTGGTGTGTTTGAAACATTGAATCAAGGTCCAAACATGACAACACAGATAGATTTCTTTCAAAGGGAAATAGAAGACGAAGTATTCACAACCTCAGATTTTATAAATTCAGTTGCTCTTGTTTCTGTCGCTATCAATGACTACAATCGTTATACTATCAAAAATGGCTCTATTGAGGGTTTACCATCATTCATATCTTTAGTGGTTAATCAAACAATCACAAACGTAATGCGCATCAAAGAATTAGGAGTCAAAAAAGTGATTATATCAAATCTACTACCACTTGGATGTCTACCTTATGAAACAACTTCATCTTCATTCAAACAATGCAATGAAACAACCAACAACCTCGTCGTAACTTACCATAACACCCTCTTAACCGAAGCTGTGAAAAAATTGAACCAACAAATCGAGGATCATTCTTCATCACCCTTTATAGTTCTTGATATATACGATAGTTTCATGTGGGTGTTGAAGCATCCTTCCACATACAATATTAATAATGATTTGAAACCTTGTTGTATTGGAGTGAGTAGTAAGTATTTTTGTGGAATGGTTGTGGAGAAGGTTAAGATGTATAAGGTTTGTGAGAATCCTGAATCTGCTTTCTTTTGGGATATGGGTCATCCTACTGATGCAGGGTGGCATGCTATTTATACCAGGCTAAGAATAACGAATGCTCTTGAACAGATTCATGATCATTAG 1071 0.3632 MDLFPFILSFIFIILHLSGQRVVRGEDDIQHHHHKEPITKLFVFGDSYVDTGNINKKGFAPSWKQPYGITFPGKPSGRFSDGRVLTDYIAEYLNVKLPASYSKREHVAPHQLKNGMSFAFCGTGVFETLNQGPNMTTQIDFFQREIEDEVFTTSDFINSVALVSVAINDYNRYTIKNGSIEGLPSFISLVVNQTITNVMRIKELGVKKVIISNLLPLGCLPYETTSSSFKQCNETTNNLVVTYHNTLLTEAVKKLNQQIEDHSSSPFIVLDIYDSFMWVLKHPSTYNINNDLKPCCIGVSSKYFCGMVVEKVKMYKVCENPESAFFWDMGHPTDAGWHAIYTRLRITNALEQIHDH 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03205 356 Pfam GDSL-like Lipase/Acylhydrolase 41 340 IPR001087 GO:0016788
Vifa5g03205 356 PANTHER OSJNBB0059K02.9 PROTEIN 20 353 - -
Vifa5g03205 356 Gene3D SGNH hydrolase 26 350 IPR036514 -
Vifa5g03205 356 SUPERFAMILY SGNH hydrolase 40 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03205 Vifa-Chr5 1061339180 1061340636 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa5g03205 38 335 Acyl Lipid Metabolism Gene Families AT4G10950 27.586 3.72e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03205 - - psat:127128969 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03205 5 1061339180 1061340636 Vifa5g03205 5 1061339180 1061340636 ECH
Vifa5g03205 5 1061339180 1061340636 Vifa3g01051 3 261162211 261163978 PCT