Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03168 ATGAGAGGTGAAATGGTGAGTGGGTCATGGCTCAATTCTCTGTGGCCGGTATCGCGAAAGAATGCCTTAGATAACAAGGCGGTAGTTGGAATTTTGGCGTTAGAAGTTACGAGTTTGATGTCGAAGATAACTAATTTGTGGCGGTCTTTGAGTGATTGGGAAGTAATGAGTTTGAGGGAAGGGATAGTGAACTCTGTTGGGATCAAAATGTTGGTTTCTGAGGAAGATGATTACTTGATGGAGCTTGTATTGAATGATATACTTGATAACTTTCAGTTTCTAGCGCAATCTGTTGTTAGGTTTGGTAAGAGGTGCGCGGATCCGGTTTACCATCGGTTTGAACATTTTGTTCGCAATCCAGTTCAGAATTATATTCAATGGTCAGGGTGGGAATATAAATGGAAAAAGATGGAGAGGAAAGTGAAGAAAATGGAGAAAATGGTCGCCTCCATGACGCAGTATTGCCAAGAGCTTGAAGTACTAGCAGAAGTTGAACAGACTTTTAGGAGAATGCAGGCGAATCCTGAACTCCATCGGGTAAAGTTGCTCGAGTTTCAGAAGAAGGTCGCGTGTCGTCGTCAGGAAGTGAGGAATCTAAGAGACATGTCTCCGTGGAATAGAAGTTATGAATACGTCGTCCGGTTGCTGGTAAAATCACTATTCACCATACTCGAGAGGATCATACTTGTGTTTGGAAATACTCAGATACCATCGTTGCAACAAGAAAACGACTCTCAGGTTGTGAATGCTGACAATTTTTTGCGTAGCCAATCTTTTTCTGTTTTTATGCATTCTTCCATTTATCCTTCGGAGAATGACCTCTACGGATTCAACAACCTGGGTTCTGTTGGGAGGAGGCCGTACTTTTCATTCGACAAGAGCAAGAAAACGAAGGAACATAAGAAGGCTCTTCATCCATCAGATAAACGCGGAAAGCACAAACGTTCGGAAAGCAAGCAGTTAGGAAATATCGGTCCATTCAAAAGTTGCATGTCTGTCACAAGCAACTCTCCTGTCATACAGAACTGCGTGCAGCAGACAAACGGGTACGGTGGTTCCATGAGGTTGCCTGATTCTAATATGAAACACGTTGATAAAATGAAAACAGCAGAAAATTTATCTCTCTGCAATAGAATTAGAATATATTCTAAGTTATGCATCAACAATACGTTAAAGCCAGGTTCGGGTTCGCTTACCCTTGGTGATGCGGCTTTAGCCCTACATTATGCGAATATGATTGTATTGATTGAGAAGATGGCATCATCGCCTCACTCGGTTGACCTCAAAGCAAGAGATGATCTGTACAATATGCTTCCTACTAGAATACAAATCGTTACGAGGGCTAAGCTCAAATGTCGTACAACAAACAAGTCTTCCTCTATCGATAATGCAGACCTTGCAGCAAAATGGAGTACGGTGCTTACGCAGACGTTAGAATGGTTGGCTCCACTTGCACATAACACCATAAGTTGGCATTCCGAGAGAAACTATGAGAAGGAGCATGCAACTGTAAAAGCAAATGTTTTACTAGTGCAAACACTTTTTTATGCAAATCAAGCTAAAGCTGAAGCTGCAATGGTTGATCTTCTTGTTGGTCTCAACTATGTATTCATGATAACAAAAGTAGGTATGAGAGATAGAATGAGAAAGATGTGA 1656 0.4161 MRGEMVSGSWLNSLWPVSRKNALDNKAVVGILALEVTSLMSKITNLWRSLSDWEVMSLREGIVNSVGIKMLVSEEDDYLMELVLNDILDNFQFLAQSVVRFGKRCADPVYHRFEHFVRNPVQNYIQWSGWEYKWKKMERKVKKMEKMVASMTQYCQELEVLAEVEQTFRRMQANPELHRVKLLEFQKKVACRRQEVRNLRDMSPWNRSYEYVVRLLVKSLFTILERIILVFGNTQIPSLQQENDSQVVNADNFLRSQSFSVFMHSSIYPSENDLYGFNNLGSVGRRPYFSFDKSKKTKEHKKALHPSDKRGKHKRSESKQLGNIGPFKSCMSVTSNSPVIQNCVQQTNGYGGSMRLPDSNMKHVDKMKTAENLSLCNRIRIYSKLCINNTLKPGSGSLTLGDAALALHYANMIVLIEKMASSPHSVDLKARDDLYNMLPTRIQIVTRAKLKCRTTNKSSSIDNADLAAKWSTVLTQTLEWLAPLAHNTISWHSERNYEKEHATVKANVLLVQTLFYANQAKAEAAMVDLLVGLNYVFMITKVGMRDRMRKM 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03168 551 MobiDBLite consensus disorder prediction 291 323 - -
Vifa5g03168 551 PANTHER BNAC09G50660D PROTEIN 23 540 - -
Vifa5g03168 551 Pfam Protein of unknown function (DUF668) 399 489 IPR007700 GO:0045927
Vifa5g03168 551 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03168 Vifa-Chr5 1049623071 1049624726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03168 - - gmx:100809482 730.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03168 5 1049623071 1049624726 Vifa5g03168 5 1049623071 1049624726 ECH
Vifa5g03168 5 1049623071 1049624726 Vifa3g00982 3 240049538 240051097 PCT