Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00982 ATGAAAGGTGAAGCAGTAAACGTGACATGGTTCGGTGGTATTTGGCCTAGGAATGGTTCAGATGAAAAGGATGGAGTTGGAATTATGTCCTTTGAAGTTGCGGGGTTGATGTCAAAAATTGTTAACTTTTGGCATTCTTTGAGTGATAATGAAGTAATGAATCTAAGAGAATGGATAGTGAATTCAGTTGGTGTCAAAATGCTTGTTTCTGATGATGAATATTTCTTGATGGAACTTGCATGGAATGAGATACTCAATAACTTTCAATCTCTAACACAATCTGTGGCAAGGTTAGGAAAAAGGTGTAAGGATCCTATATATCAAAGCTATGAAAGTTTTGTTCATAACCCTTTTGAGGATTATGCTCAATGGTCAGGTTGGGAATATAGATGGAAAAAAATGGAGAGAAAGGTGAAGAAAATGGAAAGATTTGTTGCTTCTATGTCACTTTTGTCACAAGAGATTGAAGTGTTGGCTGAGTGTGAACAAACTTTGAGGAGAATGAAGTTGAATCGATATGGCGATGTTGTTAGCAAGACGAAATTGCTCGAGTTTGAGAAGAAGGTTATGTGGCAAAGGAATCAAGTGCAAAATGTGAGAGATTTATCTCCTTGGAGTAGAAGTTATGATTATGTTGTTAGATTGTTAGCAAGATCATTGTTCACAATTCTTGAGAGAATCATACTCGTGTTTGGAAATAGTCATTTACCAATTGAAAACCAACAACATGATTCATCAACATCAAAGAACAATACTAATAATCGTCTCGGGCGCAACCATTCGTTCCCTGCTCTCAATGTAATGCAATCTTCGGTTCATCCTTCTGAGACGAATCTAAACGAATATTCTTCGGGGCCTATTGAAAGAAAGAGCAAGAGCAAGAAAAAGAAGAAAGAACAAGTGTTTCATTCACAAGATTCATATGAAAGGCTTCTTCCCTTGGAAGGCAAGCAATTGAAATATATTGGATCATTCAAAGGTTGCGTATTGGTTCGAAACGGTGGATCTACGAGGTCGGTACTTGATAAACCGTCTCTCTTTCATAGAAGTAGAGTTTATTCTAAACTATCTCTCAAGGAGAAGTTAAAGCCGGTTCCATCAACACTTGGAGATGCAGGTTTAGCACTACATTATGCAAATATGATTGTATCAATAGAGAAGATAGTGTCATCGCCTCGTACGGATAAGATCAATCTTCGAATGAGAGACGATCTTTACGATAAGCTACCGAAGACTATAAGAACAGCTTTAAGGGGTAAGCTTAAATGGTATGCTACTGTGAATGGTGATAATCTTGAAGTGGAATGGAATGTGGTAATAACTCAGATATTGGAGTGGCTAGCTCCACTTGCAAACAACATGGTAAAGTGGCATTGTGAGAGGAATTTTGAGAAGGAACATACTTATTTGAAAGCAAATGTTTTACTTGTACAAACTCTTTATTTTGCAAACCAAACAAAAACTGAAGCTGCAATTGTTGAACTCCTTGTTGGTCTACATTATGTATGCAGGATTCATAGAAAAGGGTATAGATCACTTAAGAAGGAATTAGTTGTATAA 1560 0.3692 MKGEAVNVTWFGGIWPRNGSDEKDGVGIMSFEVAGLMSKIVNFWHSLSDNEVMNLREWIVNSVGVKMLVSDDEYFLMELAWNEILNNFQSLTQSVARLGKRCKDPIYQSYESFVHNPFEDYAQWSGWEYRWKKMERKVKKMERFVASMSLLSQEIEVLAECEQTLRRMKLNRYGDVVSKTKLLEFEKKVMWQRNQVQNVRDLSPWSRSYDYVVRLLARSLFTILERIILVFGNSHLPIENQQHDSSTSKNNTNNRLGRNHSFPALNVMQSSVHPSETNLNEYSSGPIERKSKSKKKKKEQVFHSQDSYERLLPLEGKQLKYIGSFKGCVLVRNGGSTRSVLDKPSLFHRSRVYSKLSLKEKLKPVPSTLGDAGLALHYANMIVSIEKIVSSPRTDKINLRMRDDLYDKLPKTIRTALRGKLKWYATVNGDNLEVEWNVVITQILEWLAPLANNMVKWHCERNFEKEHTYLKANVLLVQTLYFANQTKTEAAIVELLVGLHYVCRIHRKGYRSLKKELVV 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00982 519 PANTHER BNAC09G50660D PROTEIN 22 509 - -
Vifa3g00982 519 Pfam Protein of unknown function (DUF668) 368 456 IPR007700 GO:0045927
Vifa3g00982 519 MobiDBLite consensus disorder prediction 239 260 - -
Vifa3g00982 519 MobiDBLite consensus disorder prediction 275 302 - -
Vifa3g00982 519 Pfam Domain of unknown function (DUF3475) 28 84 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00982 Vifa-Chr3 240049538 240051097 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00982 - - gmx:100804666 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00982 3 240049538 240051097 Vifa3g00982 3 240049538 240051097 ECH
Vifa5g03168 5 1049623071 1049624726 Vifa3g00982 3 240049538 240051097 PCT