Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03131 ATGGCTTCAACATCATATTCATCTCCATCTTCATCTATTAAGCTTTTATTATTCATAGTTCCACTCATAATTATTGCAGGATTAGTTTCTGTATTGGGTCCTAATCCTTCTAATTGGACTCTAATTCAAAATCCACCACTCTCATGGACTTCACAAAATGTTGTTGCTGTTGATTTTCATGACTCTCTTTTCAATCAATCTTCTACACCTCCAATTTCTATTCAACCTGTTATTGATCAACAATTGGAGAACAAAGATAAAGAAACTGTCAATGCTTCCCAAAATTTTCCTAACACAAATTCTATGAATGAATCACATATTCTTCAAGAGAAACAAAACCTCCCAAGAAAGTTCAGCATCTTAGACAGAACAGAAGCTGGTTTACTACAAGCAAGAGCTGCAATAAGAAAAGCAAAATATGAGAATCAAACACAAGACATAGATTATGTTCCAAGTGGACCAATGTATCACAACCCTAATTCATTTCACAGGAGTTACTTAGAAATGGAGAAACAATTCAAAGTATTTGTATACGAAGAAGGCGAAATTCCGGTTTTCCATAATGGACCGTGCAAAAACATATACTCAATCGAAGGCAATTTCATCCATGCTATTGAGATGAATGATCAATTTCGAACAAAAGACCCCGAAAAAGCACATGTGTTTTTCCTTCCTTTTAGTGTTGCAATGATGGTCCAATTTGTCTATGTACGCGACACTCATGATTTTGGTCCCATTAAAAAAACTGTCAAGGACTATATCAACGTCGTGTCCGAAAAATATCCCTTTTGGAATCGAAGCCTTGGAGCCGATCATTTCATGCTTTCTTGTCATGATTGGGGGCCAGAGACATCAAAGGCAGTTCCAAACTTGTTCAAAAACTCGATTCGTGCCCTCTGCAACGCCAACACCTCTGAGGCATTCAAACCAACAAAGGACGTATCTATCCCAGAAATCAATCTCCGATTTGGTACAACACATGGTTACCTCGGCGGGCCATCACCATCCAAGAGATCACTTTTAGCTTTCTACGCCGGTGGGCTTCACGGGCCCATTAGGCCGATTCTTCTCGAACATTGGGAGAACAAAGACGAAGACATTCAAGTTCACAAGTACCTTCCAAAGGATATTTCCTACTATGATATGCTCCGAAAAAGCAAGTTCTGTCTTTGTCCTAGCGGATATGAGGTAGCGAGTCCAAGAGTTGTCGAAGCGATTTACACAGGTTGTGTTCCGGTGTTAATTTCAGATCATTATGTTCCTCCATTCAATGATGTTTTGAATTGGAAATCATTTTCTGTTGAGGTTTCTGTTAAGGATATACCAAACTTGAAGAAAATATTGATGAATGTTTCTCCAAGACAATACATAAGAATGCAAAGAAGAGTAGTACAAATTCGGAGACACTTTGAGTTAAATTCTCCACCTAAGAGATTTGATGTGTTTCATATGATACTTCATTCTATATGGCTTAGAAGATTGAATTTTAGAGTTCATGATGATCAATAA 1509 0.3777 MASTSYSSPSSSIKLLLFIVPLIIIAGLVSVLGPNPSNWTLIQNPPLSWTSQNVVAVDFHDSLFNQSSTPPISIQPVIDQQLENKDKETVNASQNFPNTNSMNESHILQEKQNLPRKFSILDRTEAGLLQARAAIRKAKYENQTQDIDYVPSGPMYHNPNSFHRSYLEMEKQFKVFVYEEGEIPVFHNGPCKNIYSIEGNFIHAIEMNDQFRTKDPEKAHVFFLPFSVAMMVQFVYVRDTHDFGPIKKTVKDYINVVSEKYPFWNRSLGADHFMLSCHDWGPETSKAVPNLFKNSIRALCNANTSEAFKPTKDVSIPEINLRFGTTHGYLGGPSPSKRSLLAFYAGGLHGPIRPILLEHWENKDEDIQVHKYLPKDISYYDMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFNDVLNWKSFSVEVSVKDIPNLKKILMNVSPRQYIRMQRRVVQIRRHFELNSPPKRFDVFHMILHSIWLRRLNFRVHDDQ 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03131 502 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 32 489 IPR004263 GO:0006486|GO:0016757
Vifa5g03131 502 Pfam Exostosin family 170 450 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03131 Vifa-Chr5 1037580456 1037583753 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03131 - - gmx:100806278 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03131 5 1037580456 1037583753 Vifa5g03131 5 1037580456 1037583753 ECH
Vifa5g03131 5 1037580456 1037583753 Vifa3g00966 3 235617905 235620616 PCT