Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03067 ATGGATGAAGGTACTAAGAGAATGGAAGAAGGCATCAATGTAGCATTGGATATTGATGAAGCTAAAGACGAAGTCTTGAAGAAGCAAGAAACAACCAATATTAATGGAAATTCTAGTATTGATCAGCATGACACAGACACAATGGCTAAGCCTGCTTTGGTTAAGCAAAAGACAAAAAGGGTTGCAACACTTGATGCATTTAGAGGCCTCACCATTGTGTTGATGATATTAGTAGATGATGCTGGTGAAGCTTATCCACGCATTGATCACTCTCCATGGAATGGATGTACTTTGGCTGATTTTGTTATGCCTTTCTTTCTTTTCATTGTTGGTGTTGCCATAGCTCTTGCACTTAAGAGAATTCCCAACATAAAGTATGCTGTGAAGAAGATAATACTTAGGACATTGAAGCTTCTCTTTTGGGGCATAATTTTGCAAGGTGGATACTCTCATGCCCCCGATGAACTCAAGTATGGAGTCGATATGAAATTTATTCGATGGTGTGGCATTCTCCAGAGAATAGCCCTTGTATATTGTGTTGTGGCTCTAATAGAAACATTGACAACCAAGCTTAGACCAACTACCTTAAGTCCGGGACGTGTAGCCATTTTCTCTGCTTATAAATGGCAATGGTTTGGAGGCTTCATAGCTTTTCTCATTTACATTATCACAACCTTCGCGTTGTATGTTCCTGATTGGAGTTTTGTAGATCACGTCAATGGCAACGTACCAAAGAGATACACGGTGTTATGTGGAGTTAGAGGAGATCTAGGACCTGCATGTAACGCAGTTGGATATGTTGATAGACGAGTTTGGGGGGTTAATCATCTTTATTCTCAACCTGTTTGGAGACGCTTAAAGGCATGCACATTCAGTTATCCTGGTGAAGGAAAATTTCGCGATGATGCTCCAAGTTGGTGTCTTGCTCCATATGAACCAGAGGGCTTACTAAGTTCTATATCAGCAATCCTCTCTGGCACCATCGGAATCCATTATGGACATGTCTTGATTCATTTCAAGGGTCATTCAGAAAGGCTCAAACAATGGCTCTCAATGGGGTTTGTGTTACTTATAATAGCCATTGTCCTTCATTTTACCGATGCTATTCCAATTAACAAGCAACTCTATAGTTTGAGCTATGTTTGTTTCACTGCTGGTGCAGCTGGAATTGTCTTCTCTGCCCTCTACTTATTGATTGATGTTTGTGGAATCCGTACTCCATTCTTGTTCTTGGAATGGATAGGGATGAACGCGATGTTAGTGTTTGTGATGGCAGCTCAGGGAATTTTTGCAGCATTTGTAAATGGCTGGTATTATGAAGATCCAAACAAGTCACTAGTACACTGGATCAAGAAACATGTGTTTGTAAATGTTTGGAACTCAGAAAAAGTTGGAACTCTCTTATATGTCATCTTTGCAGAAATCACATTTTGGGGAGTAGTAGCTGGCGTGTTGCACAAGTTAAAAATATATTGGAAATTGTAA 1485 0.4 MDEGTKRMEEGINVALDIDEAKDEVLKKQETTNINGNSSIDQHDTDTMAKPALVKQKTKRVATLDAFRGLTIVLMILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPNIKYAVKKIILRTLKLLFWGIILQGGYSHAPDELKYGVDMKFIRWCGILQRIALVYCVVALIETLTTKLRPTTLSPGRVAIFSAYKWQWFGGFIAFLIYIITTFALYVPDWSFVDHVNGNVPKRYTVLCGVRGDLGPACNAVGYVDRRVWGVNHLYSQPVWRRLKACTFSYPGEGKFRDDAPSWCLAPYEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSERLKQWLSMGFVLLIIAIVLHFTDAIPINKQLYSLSYVCFTAGAAGIVFSALYLLIDVCGIRTPFLFLEWIGMNAMLVFVMAAQGIFAAFVNGWYYEDPNKSLVHWIKKHVFVNVWNSEKVGTLLYVIFAEITFWGVVAGVLHKLKIYWKL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03067 494 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 60 205 IPR012429 -
Vifa5g03067 494 PANTHER LD22376P 37 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03067 Vifa-Chr5 1013500658 1013503818 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03067 K10532 - gmx:100819967 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03067 5 1013500658 1013503818 Vifa5g03067 5 1013500658 1013503818 ECH
Vifa5g03067 5 1013500658 1013503818 Vifa3g02159 3 536127402 536132134 PCT