Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02159 ATGTCAACCGAGAATCAGATACACGATGTTGAAGTCGCAGATGAAGAACAAAGAACACCTCTTATTGCCCACGATGTTGAAGTTGCAGATAAATCTTTACCATCAATTCCTAATCAACGCCTTGTTTCTCTCGACGTCTTTCGCGGTCTAACCGTTGCGTTGATGATATTAGTTGATGACGTGGGACGGGCTTTCCCATCCTTGAATCATTCTCCATGGTTTGGGGTTACTCTTGCTGATTTCGTAATGCCGTTTTTCCTATTCGGGGTTGGTGTTTCTATCGGTCTTGTATTCAAGAAAGTCTCTAGCAAACCAAATGCTACAAAGAAAGTAATAGTGAGGACAATTAAGCTTTTTCTTTTGGGGATCTTGCTACAAGGTGGGTATTTCCATGGCCGCGGTAATTTAACTTATGGAATTGATTTAAGCAAGATACGCTGGTTTGGTGTACTTCAGAGGATATCCATTGGATATTTCTTGGCCTCAATGTCAGAGATTTGGCTTGTCAACAATAATATTTTGGTTGGTTCACCAGCAGCTTTTGCGAGGAAATACTCCATCCAGTGGATGTTTTCTATCATACTTTGCTCAGTATACCTTTGCTTGCTCTACACCCTCTATGTTCCAAATTGGAAGTTCGAACACTCTAACTTGCTTTGGTCTGGTCGTGTATCAACTATTCAAAATGTTCATTGTGAAATGAGGGGTAGCCTTGATCCACCTTGTAATGCGGTGGGATTTATTGATAGATTAATTCTTGGTGAAGATCATATGTACCAGCGTCCTGTCTACAGAAGAACAAAGGAGTGCAGTGTCAATTCTCCTGATTATGGACCCTTACCTCCAGATTCACCTGGATGGTGCCTTGCACCATTTGAGCCGGAGGGTATTTTGAGTTCACTGATGGCTGCCATTACTTGTTTCATGGGATTGCAATTTGGGCATGTACTTGTAATATTTCAGGATCACAAGCAGAGGGTACTCCTTTGGTCTGTGTTTTCCTTCTCTCTATTGGTAGTTGGATATATTCTGGAGATTTTAGGAATTCCTTTATCGAAAGCTCTGTACACATTAAGCTACATGTTCATCACCGCAGGGGCATCAGGCTTGGTTTTGACTGCTATATACTACATTGTTGACATAGAACGTTTCACAAAGCCTACAGTTTTACTACAATGGATGGGAATGAATGCCCTTATTGTGTACGCATTGGCTGCTTGTGACATTTTACCAGCAATTATCCAGGGTTTCTATTATCGTTCTCCTGAAAATAACTTGGTTGATGTCTGCGAAGCTTTAATACAGAACATATTACATTCCAAGAAGTGGGGTACACTGGCTTTTGTAATAATTGAGATTTTATTCTGGGGTCTTTTAGCTGGTTTCCTCCACAAGAAAGGGATGTATATAAAATTGTAA 1419 0.4066 MSTENQIHDVEVADEEQRTPLIAHDVEVADKSLPSIPNQRLVSLDVFRGLTVALMILVDDVGRAFPSLNHSPWFGVTLADFVMPFFLFGVGVSIGLVFKKVSSKPNATKKVIVRTIKLFLLGILLQGGYFHGRGNLTYGIDLSKIRWFGVLQRISIGYFLASMSEIWLVNNNILVGSPAAFARKYSIQWMFSIILCSVYLCLLYTLYVPNWKFEHSNLLWSGRVSTIQNVHCEMRGSLDPPCNAVGFIDRLILGEDHMYQRPVYRRTKECSVNSPDYGPLPPDSPGWCLAPFEPEGILSSLMAAITCFMGLQFGHVLVIFQDHKQRVLLWSVFSFSLLVVGYILEILGIPLSKALYTLSYMFITAGASGLVLTAIYYIVDIERFTKPTVLLQWMGMNALIVYALAACDILPAIIQGFYYRSPENNLVDVCEALIQNILHSKKWGTLAFVIIEILFWGLLAGFLHKKGMYIKL 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02159 472 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 40 189 IPR012429 -
Vifa3g02159 472 PANTHER LD22376P 19 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02159 Vifa-Chr3 536127402 536132134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02159 K10532 - gmx:100802361 780.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02159 3 536127402 536132134 Vifa3g02159 3 536127402 536132134 ECH
Vifa5g03067 5 1013500658 1013503818 Vifa3g02159 3 536127402 536132134 PCT