Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g03066 ATGAGTATACTACACGATGATATTGTGATTATTACACCACCAGAAAAAGAAGGTGAAGAAGCTACCGTCGTAACCGTTAACTGTCCTGACAAAACCGGTCTAGGTTCTGATTTATGTCGTGTCATTCTCTTATTTGGTCTCACCATTCTCAGAGGAGATGTTTCAACTGATGGGAGATGGTGCTATATAGTATTTTGGGTGGTGGGAAAAGAAAATGCAAGATGGAGTTTGTTGAAGAAGAGACTCATTGCTGCTTGCCCTCCTTTTTCTTCAGCTTTTGCATTTTCTTATTATTCTACTCATCTGCACTCTCCAAAGCCTCCTGATCTTTTTCTTTTGAAGTTTTGTTGCAAAGATCGTAAAGGTCTTTTACATGATGTGACAGAGGTTCTGTGTGAGCTAGAGCTCACCATACAGAAAGTGAAGGTTTCTACTACACCTGATGGAAGAGTGTTGGATCTATTTTTCATTACGGATACAAGAGAGCTTCTGCATACAGAGAAGAGAAGGGATGATACAGTTAACAAGTTAACAGCTATTTTGAAGAATGTTTTCAATACAATTGACATTGAATTGGTTGATCCATCTATTTTTGAGAATGTCTTCAATGCAACTGATATTGAATCAGTTGACTCAGAATTAGTTGATTCTGAAGCTACTGGTTTTTCTCAAGCATCTCTGTACCTTCCAAATGTAATCACAAATGTATTTGATTTGCAAAGTGGAACTTTTACATCAGATTCTGTTTCTATTGTGATGGATAATACATTGAGTCCCGCTCACACACTTGTTCAAATCATGTGCCATGATCACAAAGGTCTTCTTTATGACATCATGAGAACTATGAAGGAATACAATATTCAGATATGTTATGGGAGATTCTCAAAGAAAAGTAGAGGAAAATGTGAGATTGACTTGTTTATCAGGCAAGTTGATGGCAAAAAGATAGTTGATCCTAGCAAGCAAGAGTCTTTATCGTCTCGTCTTAAGATCGAACTACTCTGCCCACTCAAAGTAGCGGTAGTGAGCAGGGGTCCTGATACAGAATTGCTGGTTTCAAACCCTGTCGAATTGTCTGGCAGAGGAAGGCCACTTGTTTTTCATGATATCACTCTTGCTCTCAAAATGCTTGGACTTTGCATCTTTTCGGCTGAAGTTGGAAGATACGTGATTGGAGAGCGCGAGTGCGAAGTTTATAGAATCCTACTTGATGAAGGGGAGGGATTATCTTTTCCAAGGAACAAGATTGAGAAAGGAGTTTGGGAAATGTTGATGGGTTGGGAGTGA 1287 0.3901 MSILHDDIVIITPPEKEGEEATVVTVNCPDKTGLGSDLCRVILLFGLTILRGDVSTDGRWCYIVFWVVGKENARWSLLKKRLIAACPPFSSAFAFSYYSTHLHSPKPPDLFLLKFCCKDRKGLLHDVTEVLCELELTIQKVKVSTTPDGRVLDLFFITDTRELLHTEKRRDDTVNKLTAILKNVFNTIDIELVDPSIFENVFNATDIESVDSELVDSEATGFSQASLYLPNVITNVFDLQSGTFTSDSVSIVMDNTLSPAHTLVQIMCHDHKGLLYDIMRTMKEYNIQICYGRFSKKSRGKCEIDLFIRQVDGKKIVDPSKQESLSSRLKIELLCPLKVAVVSRGPDTELLVSNPVELSGRGRPLVFHDITLALKMLGLCIFSAEVGRYVIGERECEVYRILLDEGEGLSFPRNKIEKGVWEMLMGWE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g03066 428 SUPERFAMILY ACT-like 108 191 IPR045865 -
Vifa5g03066 428 ProSiteProfiles ACT domain profile. 112 195 IPR002912 -
Vifa5g03066 428 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 17 416 IPR040217 -
Vifa5g03066 428 SUPERFAMILY ACT-like 20 83 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g03066 Vifa-Chr5 1013481264 1013483305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g03066 - - gmx:100818216 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g03066 5 1013481264 1013483305 Vifa5g03066 5 1013481264 1013483305 ECH
Vifa5g03066 5 1013481264 1013483305 Vifa3g00898 3 223240064 223242618 PCT