Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00898 ATGGGAATACTATACGACGATGTAGTGATTATCAAGCCACCAGAAAAAGAAGGTGACCCATCTATGATTACTGTGAATTGCCCCGACAAAACCGGTCTTGGTTGTGACTTATGTCGTATCATACTCTTCTTTGGTCTAAACATTGTTAGAGGAGATGTGTCAACGGATGGAAAGTGGTGCTACATAGTTTTCTGGGTTGTTGGGAAACAGAAGACAAGGTGGAGTTTGTTGAAGAAGAGGATGGTTGAAGCATGTCCATCTTGTTCCTCAGCTTCTGGAATCTCTTATTATTGTTCTGATTTGGGGCCATCTAAGCCTCCTGATGTTTTCCTTTTGAAATTCTGCTGTCATGATCGGAAAGGACTATTACACGATGTTACTGCGGTTCTGTCTGAGCTAGAGCTTTTGATTATCAAAGTCAAGGTTTCCACTACACCCGATGGCAAAGTCTTGGATCTGTTTTTTATCATAGATACCAGAGATCTTCTACATACAAAGACGAGAAAGGATGATACGATCGAACAGATAAAAGGTGTTTTGGAGGATTCCGTACTTACTATGGACATCGAATTGGTTGGCCCGGAAATTTCTGCTTGTTCGCAGGCCTCTTCATTCCTTCCATCTGCCATCACTGAAAACGATTATAATTTGGAATTGCCTGATTCAGTTCAAACCGGAACTCTCCGATCAGATTATACTTCTATCACGGTGGACAACACCCTTAGTCCGGCTCATTCCCTTGTCCAAATTACGTGCCAAGACCACAAAGGTCTTCTTTATGACATAATGAGAACTCTCAAAGACTACAACATCAAGATTTCGTTCGGGCGTTTCACTACAAAACCTCGACGAAAATGTGAGATGGACTTGTTCATCATGCAAGCAGATGGAAAAAAGATAGTTGACCCTAACAAGCAGAGTTCTTTGTTGTCGCGCCTTAGAACGGAACTATATCGTCCACTAAGAGTAGCTGTTGTGAGCCGAGGCCCTGATACCGAGCTTCTAGTTGCAAACCCTGTCGAGTTGTCTGGCGAAGGACGGCCTCTAGTTTTTTATGATATTACACTTGCTCTCAAAATGCTCGAAATTTGCATCTTTTCGGCTGAAATAGGGAGACACTCGATCGGAGACCGGGAGTGGGAAGTTTATAGAATCTTGCTCGACGAAGGGGAGGGTTTGTCTGTTCCGAGGAACAAGATTGAGGAGGGAGTTTGGAAGATGTTGATGGGTTGGGAGTGA 1239 0.4342 MGILYDDVVIIKPPEKEGDPSMITVNCPDKTGLGCDLCRIILFFGLNIVRGDVSTDGKWCYIVFWVVGKQKTRWSLLKKRMVEACPSCSSASGISYYCSDLGPSKPPDVFLLKFCCHDRKGLLHDVTAVLSELELLIIKVKVSTTPDGKVLDLFFIIDTRDLLHTKTRKDDTIEQIKGVLEDSVLTMDIELVGPEISACSQASSFLPSAITENDYNLELPDSVQTGTLRSDYTSITVDNTLSPAHSLVQITCQDHKGLLYDIMRTLKDYNIKISFGRFTTKPRRKCEMDLFIMQADGKKIVDPNKQSSLLSRLRTELYRPLRVAVVSRGPDTELLVANPVELSGEGRPLVFYDITLALKMLEICIFSAEIGRHSIGDREWEVYRILLDEGEGLSVPRNKIEEGVWKMLMGWE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00898 412 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 9 400 IPR040217 -
Vifa3g00898 412 ProSiteProfiles ACT domain profile. 247 328 IPR002912 -
Vifa3g00898 412 SUPERFAMILY ACT-like 107 181 IPR045865 -
Vifa3g00898 412 Pfam ACT domain 112 164 IPR002912 -
Vifa3g00898 412 Gene3D - 111 184 - -
Vifa3g00898 412 ProSiteProfiles ACT domain profile. 111 187 IPR002912 -
Vifa3g00898 412 SUPERFAMILY ACT-like 19 79 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00898 Vifa-Chr3 223240064 223242618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00898 - - gmx:100816138 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00898 3 223240064 223242618 Vifa3g00898 3 223240064 223242618 ECH
Vifa5g03066 5 1013481264 1013483305 Vifa3g00898 3 223240064 223242618 PCT