Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02907 ATGGCAGCCCTAACCCGCTTCGTAAAGCGCACAACACCCTTATATTCCTTAGCGCGTGGTTTCTCTTCCACAAATCCCCACGCGCCTCCGCGTGAAAACAGGAATATTCAATGGGTTTTCTTGGGCTGTCCCGGCGTCGGTAAAGGCACCTACGCCAGCCGCCTCTGTAACCTCCTCGGCGTCCCTCATATCGCCACCGGTGATCTCGTTCGTCACGAGCTTTCCTCCAAGGGCCCCCTTTCTTCAAAGCTATCAGAAATAGTAAATCAGGGTCAATTAGTGTCGGATGAAATCATTATAAACTTGTTGTCAAAGAGACTGGCCGATGGACAAGCTAAAGGCGAATCAGGTTTCATTCTTGACGGTTTTCCTCGAACAATAAACCAAGCAGAAATATTGGAAGGGGTGACTGACATTGACTTGGTGGTCAATCTGAAGATCCGAGAAGAAGTACTGCTTGCAAAATGCCTTGGTAGGAGAACTTGCAGTCAGTGTGGAGGAAATTTTAACGTGGCTTCCATTAATATCAAGGGTGAGAATGGTCGCCCTGGAATGAGTATGGCTCCACTTCTTCCTCCTGAGCATTGTATGTCTAAGCTCATTACTCGTTCTGATGATACTGAACCAATAGTCAAAGAAAGGCTCCGTGTATACAATGAATTGAGTCAACCTGTGGAGGGGTTTTACCATGGCAAAGGCAAACTGTTAGAGTTTGAGCTGCCCGGAGGGATCCCGGAATCTTGGCCAAAGTTGCTGCAAGCTCTTAATCTAGATGATTATGAAGAGAAGCAGTCTGTTGCAGCATAA 807 0.4721 MAALTRFVKRTTPLYSLARGFSSTNPHAPPRENRNIQWVFLGCPGVGKGTYASRLCNLLGVPHIATGDLVRHELSSKGPLSSKLSEIVNQGQLVSDEIIINLLSKRLADGQAKGESGFILDGFPRTINQAEILEGVTDIDLVVNLKIREEVLLAKCLGRRTCSQCGGNFNVASINIKGENGRPGMSMAPLLPPEHCMSKLITRSDDTEPIVKERLRVYNELSQPVEGFYHGKGKLLEFELPGGIPESWPKLLQALNLDDYEEKQSVAA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02907 268 CDD ADK 37 239 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 Pfam Adenylate kinase 41 233 - -
Vifa5g02907 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 256 IPR027417 -
Vifa5g02907 268 Hamap Adenylate kinase [adk]. 36 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 PANTHER NUCLEOTIDE KINASE 29 253 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 ProSitePatterns Adenylate kinase signature. 118 129 IPR033690 -
Vifa5g02907 268 Gene3D - 23 257 IPR027417 -
Vifa5g02907 268 NCBIfam adenylate kinase 37 256 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vifa5g02907 268 PRINTS Adenylate kinase signature 39 52 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 PRINTS Adenylate kinase signature 67 81 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 PRINTS Adenylate kinase signature 220 234 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 PRINTS Adenylate kinase signature 118 134 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vifa5g02907 268 PRINTS Adenylate kinase signature 203 218 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02907 Vifa-Chr5 960642786 960644258 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02907 K00939 - gmx:102666238 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02907 5 960642786 960644258 Vifa5g02907 5 960642786 960644258 ECH
Vifa5g02907 5 960642786 960644258 Vifa3g01140 3 297532264 297535743 PCT