Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02766 ATGAGGCGGCGCCCTGTGGCGGGCATCCTCCCAGATCAAATGGAGAAATCAACAACCAAAACTCAAACCTCCCGAATCTGCTTCCTCGCTGTCCTCACCGCTTTCTTCTGGCTCTTACTCCTTTACTTCCATTTCATCATCCTCCCCCAACAAGATCAACATCAACCCACCATAACCGCCACCGTAAACCACCAACTAATCCCCCTCAAACACCAACCACCACCACTGCCACCACCACAATTCAAGACTCCTCCAAGGAAGAACTATGGGTTCCCTAATAAGTCAACACTACAGCTTCAATCACAAACCCCTCCCAAATCCAACTTCCCCTTCACAAAAGCACTCGCAACTTCCAACAATAAAACCGATCCATGTGGAGGAAGATACATTTACGTCCATGATCTTCCTTCCAGGTTCAACCAAGACATGTTACGAGACTGCAAAACATTGTCTCTCTGGACCAACATGTGCAAGTTCACCACCAATGCAGGTCTTGGTCCGCCTCTCGAAAACATCAACGGAGTCTTCTCCGATAAAGGCTGGTACGCTACTAACCAATTCGCTGTTGATGTCATTTTCGCCAATAGAATGAAACAGTATGAATGCTTGACTAAAGACTCTTCCATTGCTGCTGCTGTGTTTGTGCCGTTTTACGCTGGCTTTGACATTGCTCGTTATCTTTGGGGTTATAATATTTCTATGAGAGATGCTGCTTCGCTTGATCTTGTTGATTGGTTGACCAAGCGGCCCCAGTGGGGGATCATGAACGGGAGAGATCATTTTCTTGTTGCGGGTAGGATAACTTGGGATTTTAGGAGATTGTCTGAGGAGGAATCGGATTGGGGGAACAAGCTTTTGTTTTTACCAGCTGCTAAGAATATGTCTATGCTTGTTGTTGAATCTAGTCCTTGGAATGCGAATGATTTTGGGATTCCTTATCCTACTTATTTCCATCCTGCAAAAGATGAGGATGTGTTTCTTTGGCAGGAAAGGATGAGGAAGTTGGAGAGGAAATGGCTTTTTTCTTTTGCAGGTGCGCCGCGTCCGGGTAACGCGAAATCAATTAGGGGACAGATAATTGAGCAATGTAGGAGTTCTAAGGGGGATTCTTATACTAGAAGATCTGCTTTTGATTCAATGCTTGCTGGTTGTATACCTGTGTTTTTCCATCCGGGTTCCGCGTATACGCAATATACCTGGCATCTACCTAAGGATTATACTAAGTATTCTGTATTCATTCCCGAGGATGATATTCGAAAGAAGAGTGCTACTATAGAGCAGAGGCTTAGGCAGATACCTGAGGAGCAAGTGAGGGTCATGAGAGAGAAGGTTACCAATTTGAGGAAGGATATCATTGAAGGTCGCACCGACGAAAACTTCATTGAGGAGAATAGTTGGAAATATGCACTGTTGGATGAGGGACAGCGTGAAGTAGGGCTTCATGAATGGGATCCTTTCTTCTCTAAACCTAAGGGGGGAAATGGCGAATCCACTGATTCCTCTGCTGAAGCTGCGAAAAATTCTTGGAAAAATGAGCAAAGAACTCAATAA 1551 0.45 MRRRPVAGILPDQMEKSTTKTQTSRICFLAVLTAFFWLLLLYFHFIILPQQDQHQPTITATVNHQLIPLKHQPPPLPPPQFKTPPRKNYGFPNKSTLQLQSQTPPKSNFPFTKALATSNNKTDPCGGRYIYVHDLPSRFNQDMLRDCKTLSLWTNMCKFTTNAGLGPPLENINGVFSDKGWYATNQFAVDVIFANRMKQYECLTKDSSIAAAVFVPFYAGFDIARYLWGYNISMRDAASLDLVDWLTKRPQWGIMNGRDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDEDVFLWQERMRKLERKWLFSFAGAPRPGNAKSIRGQIIEQCRSSKGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKDYTKYSVFIPEDDIRKKSATIEQRLRQIPEEQVRVMREKVTNLRKDIIEGRTDENFIEENSWKYALLDEGQREVGLHEWDPFFSKPKGGNGESTDSSAEAAKNSWKNEQRTQ 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02766 516 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 39 445 IPR004263 GO:0006486|GO:0016757
Vifa5g02766 516 MobiDBLite consensus disorder prediction 493 516 - -
Vifa5g02766 516 MobiDBLite consensus disorder prediction 482 516 - -
Vifa5g02766 516 Pfam Exostosin family 364 427 IPR040911 -
Vifa5g02766 516 Pfam Exostosin family 125 365 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02766 Vifa-Chr5 918655443 918657197 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02766 K20888 - gmx:100811811 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02766 5 918655443 918657197 Vifa3g01246 3 322787086 322788867 PCT