Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01246 ATGCAGAGACGGCGCTCTGTCACCGGCGTTCTCCCTGGCCAAATGGAAAAAGCTGGATCAAAGAATCAAAATTCCAGACTTTGCTGTTTAGCATTCCTATCTGCATTCCTCTGGTTTTTCTTATTGTACTTTCATTTTGTGTTTCTTAGAGGTGATAATAGTAATGCTAATACTAGTACTACTCAATTTGTTGATCATCACACAACCACTTTAACACCTGTTATACATGAATCTACCTCAATCCATGTTAATGTCCCTGAAGTTAAACCCCCTCCTAGGAAGATTGGTTTACCGAACTCGAACCCAAACCCGGTTGAGATAAAGAGTTATCCCCCTCCCCCTAAGAGTTTTCCTTTTAGTAAAGCATTGACAAGTGGTGACAATAAGAGTGATCCTTGTGGGGGGAGGTATATTTATGTGCATGATCTTCCTTCAAGGTTTAATGAGGATATGTTGAAGGAGTGCAAAAGTTTGAGTCTCTGGACTAATATGTGTAAGTTTACTACCAATGCTGGTCTTGGGCCGCCGCTTGAGAATGTTGAAGGGGTGTTTTCTGATACGGGTTGGTATGCCACGAATCAGTTTGCGGTGGATGTTATATTTAGTAATCGGATGAAACAGTATGAATGCTTGACTAATGATTCGTCTGTTGCTGCTGCAATTTTTGTACCCTTTTATGCTGGGTTTGACATTGCGAGGTATCTTTGGGGTTATAATATTTCGAGGAGGGATGCGGCTTCGCTTGATCTGGTTGATTGGCTTATGAAGAGGCCGGAGTGGAGTATAATGAATGGGCAGGATCATTTTCTTGTCGCGGGGAGGATAACGTGGGATTTTCGAAGATTGTCTGAGGAAGAGTCTGATTGGGGGAGTAAGCTTTTGTTTTTACCGGCAGCGAAGAATATGTCCATGCTTGTGGTAGAGTCCAGTCCATGGAATGCGAATGATTTTGGGATTCCGTATCCTACGTATTTTCACCCTGCGAAAGATGCGGATGTGTTCAATTGGCAGAAGAGAATGAGGGGATTAGAGAGGAAATGGCTTTTCTCCTTTGCTGGAGCTCCGCGTCCTGGTAATGTCAAATCGATCAGGGGTCAACTGATTGAGCAATGCAGAAGTTCGCCGGTTGGTAAGCTGTTGGAATGTGACTTTGGTGAAAGCAAATGTCATTCTCCTAGTAGCATAATGCAAATGTTTCAAAGCTCGCAATTCTGCTTGCAACCTCAAGGTGATTCGTACACGAGAAGATCTGCGTTTGATTCAATGTTGGCTGGTTGTATACCTGTCTTCTTCCATCCAGGTTCGGCATACACACAATATACCTGGCATCTTCCTAAGAATTATACCAAGTATTCCGTCTTCATTCCAGAGGATGACATTCGTAAGAAGAATATGAGTATAGAGCAAATACTTCGTCAGATACCTCCTGAACAAGAGAAACTCATGAGAGAAGAGGTCATTAATCTCATTCCAAGCCTAGTATATGCTGACCCTCGCTCCAAGTTAGAAACTCTTAAAGACGCATTTGATGTTGCTGTACAAGCTGTAATTAACAAAGTTACACATTTGAGGAAGGATATTATTAACGATAATATCGATAAAAACTTTATTGAGGAGAACAGTTGGAAATATGCTCTGTTGGATGAGGGAAAGCATGAAGTAGGACCTCATGAATGGGATCCTTTCTTCTCAAAACCAAAGGATGGTAGTGGAGATTCCAGTGATTCGTCTGCCGCAGCTGCAAAAAACTCTTGGAAGAATGAGCAAAGGAAGTGGAAATGA 1782 0.422 MQRRRSVTGVLPGQMEKAGSKNQNSRLCCLAFLSAFLWFFLLYFHFVFLRGDNSNANTSTTQFVDHHTTTLTPVIHESTSIHVNVPEVKPPPRKIGLPNSNPNPVEIKSYPPPPKSFPFSKALTSGDNKSDPCGGRYIYVHDLPSRFNEDMLKECKSLSLWTNMCKFTTNAGLGPPLENVEGVFSDTGWYATNQFAVDVIFSNRMKQYECLTNDSSVAAAIFVPFYAGFDIARYLWGYNISRRDAASLDLVDWLMKRPEWSIMNGQDHFLVAGRITWDFRRLSEEESDWGSKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFNWQKRMRGLERKWLFSFAGAPRPGNVKSIRGQLIEQCRSSPVGKLLECDFGESKCHSPSSIMQMFQSSQFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKKNMSIEQILRQIPPEQEKLMREEVINLIPSLVYADPRSKLETLKDAFDVAVQAVINKVTHLRKDIINDNIDKNFIEENSWKYALLDEGKHEVGPHEWDPFFSKPKDGSGDSSDSSAAAAKNSWKNEQRKWK 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01246 593 MobiDBLite consensus disorder prediction 557 593 - -
Vifa3g01246 593 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 37 514 IPR004263 GO:0006486|GO:0016757
Vifa3g01246 593 Pfam Exostosin family 133 469 IPR040911 -
Vifa3g01246 593 MobiDBLite consensus disorder prediction 569 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01246 Vifa-Chr3 322787086 322788867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01246 K20888 - gmx:100788959 934.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01246 3 322787086 322788867 Vifa3g01246 3 322787086 322788867 ECH
Vifa5g02766 5 918655443 918657197 Vifa3g01246 3 322787086 322788867 PCT