Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02709 ATGGCCATAAACCTAGCCAAATTTCTCATACTGTTTTTCACTATTTCGATCTGCAACGCCGTCACGAATCCAAGTCCGATTTCCGATTCTCACCGTTCCGCTGCTTTACAACTCTTCGATGGTTCCTCTTCAAGTTTAGAAGAAGCCTGTGATGCTCTAAGAGTATTTGAGATTCTTGCGCTTGAGAATAAGCCTGATGTGAGCATAACCACTTGTCGGAAGGTAGTGGAAAATCTCGGGTCGTCGTCCTCTCTCAAGGATTTGTTCTATGCCTTAAAGGTCAATGGCATTTTAAAATGCAAGCTTGATAAGGGTGTTTTCCAGGGTATTGCTTCAAGACTTAAAGCTGCTGTCAATGATGCTAGTACTTTGGTTGACATATACTATACAATAGGAAGTTTGGTTCTTATAAAGGATCAGGCACCTGATATTGATGTGCTTCTTGCTGATGCTGATGGGACATTCCATTCAATCAAGGCTTTGAGCCAAAGTGATGGAAGATGGCGCTACAGTTCTGATAATCCAGAATCTAGTACCTATGCTGCTGGATTAGCACTTGAAGCATTGGCGGGAGTCATCTCATTAGCATCTTCTGAAATTGACCAGTCTAGGGTAAATACGGTGAAAAGTGATATATTTAAGCTCTTTGACAGCATCCAGAAATATGGTATGGATGATGGAACATTTTATTTTGATGAGAAATTTGGCGGTGGTCGCGAGCATCAGGGTTCTCTTTCCACATCTTCTTCAGTTGTTCGAGGGATTACATCATTTGCTGCTGTAACTTCTGGAAAAATAGATCTTCCAGGGGATAAAATATTGGGTTTAGCAAAATATTTTTTAGGCATTGGGCTTCCAGGAAGTGCCAAGGACTTCTTCAATCAAATTGAATCATTAGCTCTTCTGGAGAGCAAAAGGGTTCCCGTCCCATTAGTGCTGTCACTTCCTGCAACAGTTTATTCATTGTCCAAAAAAGATCAGCTCAAGGTTACAGTGAATACAGTACTTGGTTCAGCCGCACCACCTCTTACAGTTAAGCTTGTCAGAGCTTTCCACGCTGATGCTAAACATTCTGCTGTTATTGAGGGCAAGGAACTCCAGTACGATCAAAGTAGTGGACTTCATGTCATGGGCTTCCCAGATAATGTGGATGTGGGAACATATGTGTTTGTTTTTGAGACAGCGCTTCATGATTCAGGTAGTGAAAATGATTATGCTATTGGAGGCCAAATTCACGTGCCGATATATGTCACTGGCATTGTTAAAGTTAGCAACGCAGAAATTGCAGTTCTTGGCAGTGATCTTGGAAGTGATGAAACCCAGAAAACGCTAGATTTGGCTGGAACTGATGTTGTTTCACTCTCAGCTAACCATCTTCAAAAGTTGCGTTTTTCTTTTCAGTTGATAACGCCTCATGGCCATACCTTTAAGCCTCGCCAGGCATTGCTTAAGTTGAAGCATGAGACAAAGTATGAACACATCTTTGTGGTCAGAAATACCGGCAAGAAGTTCGAGATTATTCTCGATTTTCTTGGCTTGGTGGACAAATTTTATTATCTCTCGGGCAGATATGATTTTGAGTTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTGCGGCCACTTGGTCATTTGGAATTAGATCTTCCAGAAGCACCTGAGAAAGCAGCGCATCTTCCCCCACTACCTGTCGATCCTTACTCAAGATATGGGCCAAAAGCAGAGATAGCTCACTTGTTTAGGACTCCTGAAAAGCGACCACCCCAGAATCTCTCTCTTACTTTTTTGATTGTGACCCTTTTGCCATTCATTGGCTTTTTGGTTGGGCTATTGCGTCTGGGGGTGAACTTCAAGAACTTTCCTTCGTCAGCACTACCTGCCGCATATGCCATCCTATTCCAACTTGGCACCGCCGCAGTTTTATTGCTTTATGTACTTTTCTGGTTGAAGCTGGATTTGTTCACTACACTCAAAGCACTAGGGTTTTTGGGTGCATTTCTGATGTTTGTGGGACATAGAACTCTTTCCCATCTCGCTTCAACATCAGCTAAGCTGAAGTCTGCATGA 2070 0.4261 MAINLAKFLILFFTISICNAVTNPSPISDSHRSAALQLFDGSSSSLEEACDALRVFEILALENKPDVSITTCRKVVENLGSSSSLKDLFYALKVNGILKCKLDKGVFQGIASRLKAAVNDASTLVDIYYTIGSLVLIKDQAPDIDVLLADADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSEIDQSRVNTVKSDIFKLFDSIQKYGMDDGTFYFDEKFGGGREHQGSLSTSSSVVRGITSFAAVTSGKIDLPGDKILGLAKYFLGIGLPGSAKDFFNQIESLALLESKRVPVPLVLSLPATVYSLSKKDQLKVTVNTVLGSAAPPLTVKLVRAFHADAKHSAVIEGKELQYDQSSGLHVMGFPDNVDVGTYVFVFETALHDSGSENDYAIGGQIHVPIYVTGIVKVSNAEIAVLGSDLGSDETQKTLDLAGTDVVSLSANHLQKLRFSFQLITPHGHTFKPRQALLKLKHETKYEHIFVVRNTGKKFEIILDFLGLVDKFYYLSGRYDFELTVGDAVMENSFLRPLGHLELDLPEAPEKAAHLPPLPVDPYSRYGPKAEIAHLFRTPEKRPPQNLSLTFLIVTLLPFIGFLVGLLRLGVNFKNFPSSALPAAYAILFQLGTAAVLLLYVLFWLKLDLFTTLKALGFLGAFLMFVGHRTLSHLASTSAKLKSA 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02709 689 Pfam Oligosaccharyltransferase subunit Ribophorin II 10 681 IPR008814 GO:0006487|GO:0008250|GO:0016020
Vifa5g02709 689 PANTHER RIBOPHORIN II 10 688 IPR008814 GO:0006487|GO:0008250|GO:0016020
Vifa5g02709 689 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 115 232 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02709 Vifa-Chr5 902789371 902796162 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02709 K12667 - gmx:100806815 1108.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02709 5 902789371 902796162 Vifa5g02709 5 902789371 902796162 ECH
Vifa5g02709 5 902789371 902796162 Vifa3g01286 3 329867730 329875074 PCT