Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01286 ATGGCCACAACCGCTGTAGGCGCAGCATTTCTCCTGCTGCTACTTCTCCCCTTCTGCATCTCTATCTCCCAACCGATCTCCGATTCTCACCGATCCGCCGCTTCTAACATCTTCAATGAAATCTCTCCCAGTTTAGAAGATGCGTATGAGGCACTGAGAGTTTATGAGATTCTTACAATTGAGAAGAAGCCGATTGATACCAAAGGCACTTGTAAGAAAGTGTTGGAAAATCTAGGCTCGTCTTCTTCCCCTCTTAAGGATGTGTTCTATGCGTTGAAAGTTAATGGCGTATTGAAATGCAAAGTTGATGGTGCGGTTTTCAAGGATATTGCCTCAAGACTCAAGGCCACTGTCCATGATGCAAGTACTTTGCTTGACACATACTACTCTGTAGGAAGTTTGGCTCTTATAAAGGGTCAGGCTTCAGATGTTGACGTTCTTCTAACTGATGCTAATGGTGTTTTTCAATCAATCAAGGCTCTAAGCCAAACTGATGGAAGATGGCGCTACAGCTCTGATAATCCAGAGTCTAGTACCTATGCTGCTGGATTAGCTCTTGAAGCTCTTGGTGGAGTGATTTCACTTGCATCTTCTGAAATCGATCAGAGTAAGGTCAGTATAGTAAGAAATGGTATAGTGAAGCTATTTGACAGCGTCGAGAAATATGATGATGGAGCATTTTATTTTGATGAGAAATCTGTTAAAGGATCCGAGCATCAAGGTTCCCTTTCCACGACTTCTTCAGTTGTTCGAGGGGTTGCTGCATTTGTTGCAGTAACTTCTGGGAAAATAAATCTTCCAGGGGATATAATTCTGGGTTTAGCCAAGTTTTTCCTCGGCATTGGAATCCCCGGAGATGCCAAGGACTTCTTCAATCAAGTTGAATCCTTATCCTTTTTCGAGAGCAACAGAATTTCCATTCCACTGATTTTGTCACTTCCTGAAACAGTCCATTCATTGACCAAAAAAAGCCAGCTTAAGGTCAAGGTCAATACAGTTCTTGGTTCAGATGCACCACTTCTGACAGTTAAGCTTGTCCGAGCTTTTAGCACTGGAGCAAAAAATTCAGCTATTATTGAAAACAAGGAGCTTCAGTATGACCAAAAAAGTGGATTTCATTTCTTGGATACCCTCCCAGAAAATGTTGATGTGGGAACATATGTTTTTGTTTTGGAGATTGTGCTACATGATTCTGAAAGTGACAAAGTTTATGCTACTGGAGGCCAAATTCATGTGCCAATATATGTCACAGGCGTTATTAAAGTTGGCAGTGCAGAAATTGCAGTTCTGGACAGTGATCTTGGAAATGTTGAAACCTATAAGACGCTAGATTTGGCTGGAAATGATGTCGCTTCACTCTCGGCTAACCACCTGCAGAAGTTGAGGCTTTCTTTCCAATTGGAAACTCCTCATGGCCGTGTTTTCAAGCCTCATCAGGCAATTTTAAAGTTGAAACATGAATCTAAGATTGAACACATTTTTTTGGTTGGAAGTACTGGCAAGAAGTTTGAGATCACATTTGATTTTCTTGGCTTGGTGGAAAAACTTTTTTATCTCTCTGGCAAGTATGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCCTTCTCACGACTACTCGGTCATGTCGAATTAGATCTTCCAGAAGCTCCTGAGAAAGCAGCTCGTCCTCCTCCACCACCTGTTGATCCTTACTCAAGATATGGGCCCAAAGCAGAGATTAACCACATATTCAGGGTTCCTGAAAAGCGACCACCCCAGAAACTTTCTCTCGTATTTTTGGGTTTGATCCTTTTGCCACTCATCGGCTTTTTGGTTGGGTTGTTACGTTTGGGGGTGAACCTGAAGAATTTCCCTGGTTCAACAGTACCCGCTACATTTGCCACCCTTTTCCATCTTGGTCTTGCTGCAGTTCTGTTGCTTTATGTACTTTTCTGGTTGAAGCTGGACCTATTCACCACACTCAAAATACTTGGCCTTTTGGGAGCTTTTACGATGTTTGTCGGACACAGGATTCTTTCCTATCTTGCTTTAACGTCGTCCAAGTTGAAGTCTGCATGA 2067 0.4253 MATTAVGAAFLLLLLLPFCISISQPISDSHRSAASNIFNEISPSLEDAYEALRVYEILTIEKKPIDTKGTCKKVLENLGSSSSPLKDVFYALKVNGVLKCKVDGAVFKDIASRLKATVHDASTLLDTYYSVGSLALIKGQASDVDVLLTDANGVFQSIKALSQTDGRWRYSSDNPESSTYAAGLALEALGGVISLASSEIDQSKVSIVRNGIVKLFDSVEKYDDGAFYFDEKSVKGSEHQGSLSTTSSVVRGVAAFVAVTSGKINLPGDIILGLAKFFLGIGIPGDAKDFFNQVESLSFFESNRISIPLILSLPETVHSLTKKSQLKVKVNTVLGSDAPLLTVKLVRAFSTGAKNSAIIENKELQYDQKSGFHFLDTLPENVDVGTYVFVLEIVLHDSESDKVYATGGQIHVPIYVTGVIKVGSAEIAVLDSDLGNVETYKTLDLAGNDVASLSANHLQKLRLSFQLETPHGRVFKPHQAILKLKHESKIEHIFLVGSTGKKFEITFDFLGLVEKLFYLSGKYDIELTVGDAVMENSFSRLLGHVELDLPEAPEKAARPPPPPVDPYSRYGPKAEINHIFRVPEKRPPQKLSLVFLGLILLPLIGFLVGLLRLGVNLKNFPGSTVPATFATLFHLGLAAVLLLYVLFWLKLDLFTTLKILGLLGAFTMFVGHRILSYLALTSSKLKSA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01286 688 PANTHER RIBOPHORIN II 11 687 IPR008814 GO:0006487|GO:0008250|GO:0016020
Vifa3g01286 688 Pfam Oligosaccharyltransferase subunit Ribophorin II 11 679 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01286 Vifa-Chr3 329867730 329875074 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01286 K12667 - gmx:100814831 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01286 3 329867730 329875074 Vifa3g01286 3 329867730 329875074 ECH
Vifa5g02709 5 902789371 902796162 Vifa3g01286 3 329867730 329875074 PCT