Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02662 ATGGCGTTCGCTTCTTTCCTCGGAAGAGTCCTCTTTGCCTCCGTCTTCATCCTCTCTGCTTACCAAGAATTTCATGACTATGGAGTTGATGGGGGACCTGCAGCAAAAGCAATCAGACCGAAGTTTGATGCCTTTATTAATAAAGTTGATTCACATGTTGGCTTCCAACTTCCAGAAATTGACATGAAATTTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCGTTGGAGGGATTTTTTTCATACTTGGCAGTTCACTTGGAGCTACACTTCTGCTTTTGCATCAGTTGATTACCACTCCAATATTGTATGATTTCTATAATTATGACACTGAGGACAGAGAATATATTAAACTTTTCATCAAATTTACCCAGAATATGGCCCTCTTTGGGGCTTTATTGTTTTTTATTGGGATGAAGAACTCCATTCCTAGAAGGCAACCCAAGAAGAAGGTTCCCAAAACAAAAACCTATTAG 474 0.4008 MAFASFLGRVLFASVFILSAYQEFHDYGVDGGPAAKAIRPKFDAFINKVDSHVGFQLPEIDMKFLVAGAIALKGVGGIFFILGSSLGATLLLLHQLITTPILYDFYNYDTEDREYIKLFIKFTQNMALFGALLFFIGMKNSIPRRQPKKKVPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02662 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Vifa5g02662 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02662 Vifa-Chr5 886553570 886556014 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02662 - - gmx:100817488 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02662 5 886553570 886556014 Vifa5g02662 5 886553570 886556014 ECH
Vifa3g01330 3 340103250 340104588 Vifa5g02662 5 886553570 886556014 PCT