Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01330 ATGCCTTTCGCTTCTTTTCTCGGAAGAGTTCTATTTGCTTCCATTTTCATTCTCTCTGCTTACCAAGAATATAACGAATTTGGAGTGGATGGAGGACCTTCTGCAAAAGCACTTAAACCAAAGTTTGAGGCCTTTGCACATCGAATCCATTCTCAAGTTGGCTTTCAAATTCCAAACATTGATATGAAACTTTTAATTACTGGGGCTATTGCTCTGAAGGGTCTTGGAGGAGTTCTATTCATCTTCGGAAGCGCTTTTGGAGCTTTGCTACTGCTTCTGCATCAGTTGATTGCTACACCAATTCGTTATGATTTTTACAATTACGACAATGAGGACAAAGAATTCACTCAGCTTTTCATCAAGTTTACACAGAACTTGGCTCTTTTGGGGGCTCTGTTGTTTTTCATTGGGATGAAAAACTCCACTCCTAGAAGGCAACCAAAGAAGGCTCCGAAAACAAAAACCTATTAG 471 0.3992 MPFASFLGRVLFASIFILSAYQEYNEFGVDGGPSAKALKPKFEAFAHRIHSQVGFQIPNIDMKLLITGAIALKGLGGVLFIFGSAFGALLLLLHQLIATPIRYDFYNYDNEDKEFTQLFIKFTQNLALLGALLFFIGMKNSTPRRQPKKAPKTKTY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01330 156 PANTHER HR-LIKE LESION-INDUCER 1 155 - -
Vifa3g01330 156 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01330 Vifa-Chr3 340103250 340104588 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01330 - - gmx:100305592 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01330 3 340103250 340104588 Vifa5g02662 5 886553570 886556014 PCT