Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02636 ATGTCTTCTTCTTTTTCAGAACCTCATTACAGTTCCCTCCCTTCATCCTCGAACTCCAAACCTCCAAACTTCATCTCACGCGCCACCGCAACAACAAAAACCGTATCCGTCACGCGCAGACCATGGGAGGAAGTTTTCGCACTCTACTCATTCACGCGCCCTTACTCAATCAACGAAGCCACTTCGCGCGTGAAGCGTAACCTCAACCACTTCCGCGTTAACTACATCATGATCATCCTCTTCGTCTTGTTCCTCAGTCTCCTATGGCATCCGATTTCGATCATCGTTTTCTTAGTCTCGCTCGTGGCTTGGTTTTTTCTGTACTTCTTCCGTGAAGAACCGATTGTTGTGTTTGGGCGTTCGATTGAGGATCGGGTGTCGGCGGCGGTGCTTGCGGTGGTGACTGTGGTGGCTTTAGGGTTTAGCGGTGTTTGGGTGAACACGTTGGTTTCGGTTGTGGTTGGGGTTTTAGTTGTTGTGTTGCACGCTGCGTTTAGGAGTACGGAAGATTTGTATGTGGATGAACATGAGGGGTATGATGGAGGGTTACTTTCCTTTGCTGCGGGTACCCCTACAAAACGTACTGCAGGCCAAAGTTTTAAATAA 606 0.4901 MSSSFSEPHYSSLPSSSNSKPPNFISRATATTKTVSVTRRPWEEVFALYSFTRPYSINEATSRVKRNLNHFRVNYIMIILFVLFLSLLWHPISIIVFLVSLVAWFFLYFFREEPIVVFGRSIEDRVSAAVLAVVTVVALGFSGVWVNTLVSVVVGVLVVVLHAAFRSTEDLYVDEHEGYDGGLLSFAAGTPTKRTAGQSFK 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02636 201 Pfam PRA1 family protein 38 175 IPR004895 -
Vifa5g02636 201 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 20 177 IPR004895 -
Vifa5g02636 201 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02636 Vifa-Chr5 876857279 876857884 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02636 K20359 - gmx:100794255 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02636 5 876857279 876857884 Vifa5g02636 5 876857279 876857884 ECH
Vifa5g02636 5 876857279 876857884 Vifa3g01368 3 352537061 352537651 PCT