Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01368 ATGTCTTCCATTAATCCAACTTCATCTTCACCGAGTTACAATTCTCTCCCTACAACCTCATTTCCCCCACGCGCCACCACACCCTCCAACTACCCCACGCGCCGCCCATGGGAAACCTTCTTCTCTCTCCAATCCTTCACTCCTCCCCACTCCCTCAACGAATCCACCCACCGAATAAAACGCAACCTCAACCATTTCCGAATCAACTACGCCATGATAATCCTCTTCACCCTCTTCCTCAGTCTCCTCTGGCACCCGCTCTCACTCATCGTCTTCCTCGCCGTCTTCGCCGCCTGGTTCTTTCTCTTCTTCTTCCGTGATCGCCCTGTCGTCTTCCTAAGTTGCTCCATCGACGACCGCTTCCTCCTCGCCGCACTCTCCTCCCTCACCGTCGTCGCGCTTGTTTTCACCGGTGTGTGGCTCAACGTCTTGCTCTCGGTTCTTCTTGCTGCTGCGGTGGTTGTTTTGCATTCGGCTTTTCGGAGTGTTGATGATTTGTATTTAGATCAAGTAGAGATCTTTCATGGAGATTTGTTTTCGGTTGTTGATGCTAGTTTCAATACCAATCCAACAGGGTACACTAGGATATAG 591 0.511 MSSINPTSSSPSYNSLPTTSFPPRATTPSNYPTRRPWETFFSLQSFTPPHSLNESTHRIKRNLNHFRINYAMIILFTLFLSLLWHPLSLIVFLAVFAAWFFLFFFRDRPVVFLSCSIDDRFLLAALSSLTVVALVFTGVWLNVLLSVLLAAAVVVLHSAFRSVDDLYLDQVEIFHGDLFSVVDASFNTNPTGYTRI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01368 196 MobiDBLite consensus disorder prediction 1 29 - -
Vifa3g01368 196 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 25 171 IPR004895 -
Vifa3g01368 196 Pfam PRA1 family protein 31 169 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01368 Vifa-Chr3 352537061 352537651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01368 K20359 - gmx:100815700 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01368 3 352537061 352537651 Vifa3g01368 3 352537061 352537651 ECH
Vifa5g02636 5 876857279 876857884 Vifa3g01368 3 352537061 352537651 PCT