Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02606 ATGCCTTTCACGATGAAGATTCAGCCGATCGATTCTCAGGTGCCGGCCGAGAGGATTAAGCCGGTTGTCAAGTCGCGGCTGAAGCGGCTCTTTGAGCGTCAGTTCTCAGGTGTTCTGAAGAATCCACCGGTAGAGAAGATCGGCGGCGATGAGGTGCATGCACGCAAGGACGGTAACGGTAACGGAAATGGTACCGTTGATTTTGAACCAAGCTCGGTTTGTTTGGCGAAGATGGTGCAGAGTTTCATTGAAGAGAATCAAGAGAAACATTCCGTTTCCTGTGCTCGTAATTGCTTCAACGGAAACTTCGACGATAGCTCCGACACTGAACCTCACGCGCTCGGTGGTTCTTCGTCCGGTGAAGTGTATGAAACCCTCAAGGGTTTGGTGGCGAGTCCAAATGTTTATGAAAAGAATTTGTTAGCGGAAATAGCAAAGATAATTGAGAAGAACAAAACTGTGTGCAAACGCAAAGACGATAATTGCAGAAAGACTATAACTGATGGATTGTTAACTCTTGGATACGATGCTTCAATTTGCAAATCTCGCTGGGAAAAATCCACTTTCTGTATCGCCGGGGAGTATGAATACGTTGATGTGGTAATGGGAAAGGAGAGGGTGATAATAGACGTTGACTTCAGGTCAGAATTTGAGATTGCTAGATCAACCAAGTCTTACAAAGCGATTCTCCAGACGCTTCCTTATGTATTCGTAGGAAAGAGTGATCGCTTACAAAGTATTGTAGCCATAGCTTCTGAGGCAGCAAAACAGAGTCTGAAGAAAAAGGGTCTGCATGTTCCACCATGGAGAAAACTCGAATACGTTAGATCAAAATGGTTATCTCCTTACACAAGAACCACACCACCTCTGTTTTGCAATTGGCCTCGTGAAGAAACTGAGAGAAAACAGAGGCTTTTGATGGGTGATGGTGGTGGTGACTCTGAAGTGAGCCGTGATGAGCCAGAGTCAAAAGTGGTGGTTGAATGGAAGCCACCAGAATTGAAACCCAAAAGCTCGCTGACTGGAGTTAAGGTTGTGACTGGTTTGGCAGCTGTCTTTCGTGAAAATCCATGA 1074 0.4562 MPFTMKIQPIDSQVPAERIKPVVKSRLKRLFERQFSGVLKNPPVEKIGGDEVHARKDGNGNGNGTVDFEPSSVCLAKMVQSFIEENQEKHSVSCARNCFNGNFDDSSDTEPHALGGSSSGEVYETLKGLVASPNVYEKNLLAEIAKIIEKNKTVCKRKDDNCRKTITDGLLTLGYDASICKSRWEKSTFCIAGEYEYVDVVMGKERVIIDVDFRSEFEIARSTKSYKAILQTLPYVFVGKSDRLQSIVAIASEAAKQSLKKKGLHVPPWRKLEYVRSKWLSPYTRTTPPLFCNWPREETERKQRLLMGDGGGDSEVSRDEPESKVVVEWKPPELKPKSSLTGVKVVTGLAAVFRENP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02606 357 NCBIfam uncharacterized plant-specific domain TIGR01615 163 286 IPR006502 -
Vifa5g02606 357 PANTHER OS03G0796600 PROTEIN 22 290 IPR006502 -
Vifa5g02606 357 Pfam PDDEXK-like family of unknown function 77 285 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02606 Vifa-Chr5 870013365 870014742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02606 - - gmx:100781835 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02606 5 870013365 870014742 Vifa5g02606 5 870013365 870014742 ECH
Vifa5g02606 5 870013365 870014742 Vifa3g01383 3 356672431 356673671 PCT