LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa3g01383	ATGTTTTTTACAATGAAAATTCAACCGATTGATTTTCATTTGGATGAGGAGATGACTCGAGATGAACCGGTGAAGCCGGTTGTGAAGTCGCGTCTGAAGCGGCTAATCGAGCGGCAATTCTCCGGTGTCCTGAGAATTTCTGCTTCGGAGAAGTTTGGCGGTGATCTGGAACCGCGTTTATGCAAGGAAGGATTTAACGGCGGTGGTGATTTTGAACCGAGTTCAATATGTCTGGCGAAAATGGTGACGAACTACATCGAGGAGAATAACGAGAAGCAATCGGTTTCTGTAAAGTGTGGAAAAAACCGCTGTAACTGCTTCAATAGGAACTGTGAAGACATCTCGGACGATGAATCAGATGTGCGTTGCGGTTTCGACGGTTCAAACTCGAGCTATTCATCTTCTGATGCATCTGAAATTCTCAAGGGTTTGGTAACTTGTAGAAACGTTGGTGAGAGAAATCTTCTAGCGGACACTGCAAAGATCGTTGATAAGAACAGTAAGTGCAAACGCAAGGACAGTTTCTGCAGAAAGATTGTTACCGACGGATTATTAGCTCTCGGATACGATGCATCCGTCTGTAAATCTCGCTGGGAAAAAGCATCTTCATATCCCGCTGGGGAATATGAATATATAGATGTGATGATGGAGAATGAACGGTTGATAATTGACATTGATTTCAAATCAGAATTTGAGATTGCTAGGTCTACTAAATCGTACAAGACGATTCTGCAGAATCTTCCATACATATTCGTTGGAAATTGCGATAGATTGCAGAGCATTGTGACGATTGTATCCGAGGCGGCGAAGCAGAGTTTGAAGAAGAAGGGAATGTATGTTCCGCCGTGGAGGAGAGCTGAATACGTTAATGCTAAGTGGCTTTCAGCTTACACTAGAATGAATGTGCATGTGCAAAAACAAAATAGTTTGAAGGAAAACTGTGTTGCTGAGAATTCTGGCTATTGCGGCGAATGGAAGCCGCCGGAGTTGAAGCCGAAGGGATCATTGAATGGGGTTAGAGTGGTGACTGGTTTGGCAGTGGCTTTTGAGGATGATAACCCATAG	1065	0.4376	MFFTMKIQPIDFHLDEEMTRDEPVKPVVKSRLKRLIERQFSGVLRISASEKFGGDLEPRLCKEGFNGGGDFEPSSICLAKMVTNYIEENNEKQSVSVKCGKNRCNCFNRNCEDISDDESDVRCGFDGSNSSYSSSDASEILKGLVTCRNVGERNLLADTAKIVDKNSKCKRKDSFCRKIVTDGLLALGYDASVCKSRWEKASSYPAGEYEYIDVMMENERLIIDIDFKSEFEIARSTKSYKTILQNLPYIFVGNCDRLQSIVTIVSEAAKQSLKKKGMYVPPWRRAEYVNAKWLSAYTRMNVHVQKQNSLKENCVAENSGYCGEWKPPELKPKGSLNGVRVVTGLAVAFEDDNP	354

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa3g01383	354	Pfam	PDDEXK-like family of unknown function	80	299	IPR006502	-
	Vifa3g01383	354	PANTHER	OS03G0796600 PROTEIN	27	308	IPR006502	-
	Vifa3g01383	354	NCBIfam	uncharacterized plant-specific domain TIGR01615	177	300	IPR006502	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa3g01383	Vifa-Chr3	356672431	356673671	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa3g01383	-		-	gmx:100781835	452.981

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa5g02606	5	870013365	870014742	Vifa3g01383	3	356672431	356673671	PCT