Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02581 ATGACTTCGCTATCTCGAAGTGATTCTAATAAAAAGTATTCATGGTGGTGGGACAGTCACATAAGCCCCAAGAACTCGAAATGGCTCCAAGAAAATCTCACAGATATGGATGTCAAAGTGAAGCAAATGATAAAGCTTATCGAAGAAGATGCAGATTCCTTTGCCAGAAGGGCAGAAATGTATTACAAGAAGCGTCCAGAGCTTATGAAGTTGGTTGAAGAGTTTTACCGGGCGTATCGAGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATACGTCAAGCCCATCGTACGATGGCTGAAGCTTTTCCTAATCAAGTCCCACCAGTATCAACTGACGATTTACATGCCGTTTCTTCCGTGGAGATTGGGCAGCCGCATACGCCAGATACTACCGGCCATTCACATGCATTTTCTGATTCAGATGAATTGCAAAAGGGTGATTCTACTCATGAAACAGATATTGCATTAAGCAGAAAGGGTTTGAAACAGCTTAATGATCTCTTCATGACAGGAGAATCGGAGACTAATGGAGTAAACAATGGAAGCCATGAGAATGATCTCTTGTCGGATTCCGACCGGATGTCCAGAACCGAGACAGAAGTTTTGGCATTAAAGATCAGCCTTGCTAAACTAGAAAGTGAAAAGGAAGATGGCTTGATTCAGTATCAGCAGAGTCTGGAGAGATTATCTAATCTGGAATCAGAAATGTCTCGTGCTAGAGAGAATTCTCAAGGACTTGATGACCGAGCAAGCCAAGCTGAAGCCGAAGTTCAAACCTTGAAAGAAACCCTTGATGAATTGCAGTCGGAAAGAGAAAATAGTCTTTTTCAGTACCAGCAGTGCTTAGACAAAATATCTAATCTAGAGAAAAATATTTCTTCGGCTCAAAAGGATATAGGAGAATTTAACGAACGGGCTACTAGAGCTGAAACTGAAGCCGAATCCTTAAAGGTAGACCTTGCTAGATTAGTTGCTCAAAAGGAAGCTGCTCTTTTTCAGTATAACCAGACCTTGGAGACATTGTCAAAACTAGAGGAGAAATTAGTACAAGCCGATGAGAATGCAAGGAGAACTAATGAGCAAGCTAGTATCGCTAAAAATGAAATTGAGGACATGAGATTAGAAATTGGTAAACTTATCAAAGAGAAAGAGGATGCGGCTCTTCGTTATCAGGAATGCTTGGAGATAATTTCTAGTTTGGAGCATAAACTCTCTTGTGTCCAAGAGGAGTCTTTGGCACAGAAGACGGTGTCTCAAAGTGAAGAACTTAGTGAGAAGCAGAAGGAATTGGGTAGACTTTGGAGTTGCGTACAAGACGAGATGATGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGAATGTGCATTCACAATCTCAGGAAGAACTTAAATCTCTTGCAGCTGAGCTTCATAACAAGGTTGGAATTCTTGAGAGAATGGAATCACATAAGAAGGCTTTAGAGGATGAAGTACACAAGGCCAAGGAGGAAAACAAAGTTCTAAATGATCTCAAACTGTCTTCATCATTGTCTATGAATAATTTGCAGGATGAGATATTAAATCTCAGGGAAATAATAAAGAAACTAGAACTTGAGGTTGGATTGCAAGTAGATGAAAGAAATGCTCTTCAGCAGGAGATTTACTGTCTTAAAGAGGAGCTTAATGATGTGAACAAAAGATACGAGTCCACGGAGGAGGAGGTCAGATCAACCGGCTTAGACCCACAATGCTTTTCCCTATCTGTGAAGCTATTGCAAGATGAAAACTCAAAGCTGACGCAAACATGCGAGGCTGGCAAAGATGAAAACGCAGCACTCAACAAAAAACTGGAGATCATGAAGATGCTTCTGGAGAAAAATGCTAATTTGGAGAATTCCCTTTTGGTTTTGAATTCTGAGCTGGAGAGTCTCAGAGGAATGGTAAAGGTATTAGAAGAAAATTGTGAATCCTTGCGTGCGGAGAAATCCACTCTTGCTGCTGAGAAGGCAACCCTGTCTTATCAGTTGCAAACCACAGCTGAAAAGCTGGAGAAGCTTTCAAAAAAATATCACATTTTAGAAAATTCACTATTTGATGTGAATGCGGAGCTTGAAGGATTAAGGTTAAAGTCAACGATTTTGGAAGAGACTTGCCTCTCACTTGACCATGAGAAGTTTAGTCTCGCTTCCGAGAAAGAAACCTTAGATTCGCAGTTGAACATGACTCGTCAAACACTTAAAATTCTTGAGAAACAACATAGTGAGTTGGAACTGCAACGTTTGGAGTTAAAAGCAGAAAGGGAGTCTGCACTTCAAAAGGTGGAAGATCTACTGATTTCATTATATGCTGAGAGGGAAGAACATTCTAGAATTGTGCAATTTAATGAAGGTCACTTGGTTGAGAAGGAATTTCAAATTCATATTCTACAAGAAGATGCAAATTACCAGAAGAAGGAATCTGAAGAGGAACTGGACAGAGATCTACGCACTCAGATAGAAATTCTCATCTTGCATGAATGTATTCGGGAATCGGAGCAAAATAATTTCTCCCTTCTACTTGAGCATCAGAGATTCTTGGAGGCATCCAACATGTCTGAAAGATTGATATCTAAATTAGAGAATGACAATGTTCAAAAGCAAGTCGATGCAAATTTGTTGTCTGAGAAAATTAACGTGCTAAGAATTGCGCTGCTTCATGTGTTAAAAACTCTTGACAATAACTGTGAGCATTTGCCTGAAGATAATGTTAAAGAAGACCAGAAGCTTCTGAACGATATACATGACAAACTTCAGGAGAAAGAAAATTCTTTTATCGAAGTTTTTCATGAAAATCAGCAAATGGCCATTGAGAATTCAGTTCTTGTTACATTCCTTGGCCAGTTGAAATTAAAGGCTAAAAATATTGCAACAGAAAGAGAAGCTCTTGATGGGGAGTTGAGGATCCAGTCTAAGCAATACTTGGCATTGCAAGAAGATGTCGAAAAGATGCTAGAGATGAATCAGGCATTGGAATTAACAATAAGCAGAGGAGAAGAGAAAATGGAAGTAATGACAACTGAAAATTTGATGGCACTTAAGGAACTAAGTGAAGAACTGGATAAACTTGTTTCAGTAAATACCAACCTTGAGGAGAGATTGAAAGTAATGACGGGAAAATTAGAAGATGAGCAAATGGAAAACTCATATCTTAAGGAGTCTTTTGTAGTGTCGAACATTGAACTAAAATTAGTTGAATCTGTCAACGATAAGTTAAATTGTCAGATTAGGAATGATAAGGAATTATTGTCTCAAAAGGAAAATGATATTTTGGAAGCAGCAGAGATGTTTAGTGCTTTACAGGAAGAAGAAAAAGCATTGCAAATATTGATGGTAGATCTGAAGAGTAAGTACGAAGAGGCGATTACAATACTTGAAGAGCAAGGCAGTCAAATTTTAAAATTATCCTCAGACAAGGATCATCAAATTGAAGTGAATAAGAAGTTGGAGGCAGAAATGAGGCACCTGCAACAAGAACTTGGAGAAACTAAACTGATGGAAAAAAAGCTAAGTTATGCACTACTCAAGGGAGCGGATGAGATTGAACAATGGGAATCTCAGGCTGCCATATTCTATACTGGAATGCAGATTTCTACTGTCAATGAGACATTCTTTGAAGGGAAGGTCCGGGAGCTAGCTGATGCGTGCGAGAATCTTGAATCCAGATGCAGCTCCAACGTTATGGAAAGTGAAAAGCTGAAAGAAAGAGTCGACAAGTTGGAAGACGAAAACAAGAAATTACGGGTCCAGATGGCTGCTTATGTCCCAGCTGTCAGTGGTTTAAATGATTGTATAACATCCTTGGAGATGCAGACACTTGGTCAAGCAAAACCTAATAACTCCAAAGACTCTAAGGTTAAGAAGTATGTGAATATCAAATACGCAGATGGCGATCCACGAACAAGTGTAGATCAAAATGCTACGGAAACAGATGCACTTCCAGACTTCCAAGACATGCAGAAAAGGGTTAACGCAATTGAAATGGTTATTAGACAGATGAATGAAAGTTTCAAACCTAGGGATGAAATGAGAGAGATTCAAGTTTTAAAATCTGGAATCAGCTGGCGCCAAGGAAATGCTCAAGCAAACAAGCATTCTACTCAAATGGATGAAGCCAAGGAGCAATATGGAGCTGTTTATGGACATAAGACGAGAAAATCATTGCAAGATATTCCTGTAACAGAAATCGAAGTTCTTCCGAAAGACATCATGCTTGATCATACGTCTGAATGTTCATCGTATCGGATTAGTAGGAGAGGAGCTCATAAGTCTGATGAGCAGATGCTTGAATTGTGGGAAACTGCTGATCAAGATGGCATTACTGGCGTGACAGTTGGCAAGGCACAGAAGGTCACTGCACCTATTGGATACCAACAAAGGAGACTATCCAAGGAATCCAAAAAAAAGTATCCTTCGGTAGAGTCCTTGATTGAAAAGGAATTGAGTGTAGACAAATTAGAGATCTCAAGATCACAGTCGCGGCCGCTGCTGCTTGAAGGCAATAAGAGAAAGGTTTTAGAAAGACTTGATTCAGATGCTCAAAAGCTGATGAACCTCGAAATCACCGTACAGGATTTGATAAACAAGATGAACATTATTGAGAAAACGAGCACAGTGGGAAAAGGTGTTGAGTATGATGATGTGAAAGGACAGCTTGAAGCTGCTCAAGAGGCCATCACAAAGCTGTTTGATGCCAACCGCAGGTTGATGAAGAATGTAGAAGAAGGAACTTCGTCCTTTTCTGGGAAGTCTACAACAGTGTCGGATGAGAGTGGAAGTGTCGGCAGCAGAAGAGTTTCAGAACAGGCTCGAAGAGGATCTGAAAAAATAGGACGGCTACAATTGGAGGTGCAAAGGCTTCAATTTTTACTTCTAAAATTGAATGATTACAAAGAAGGCAAAGGAAAAGCAATGATTGATGATCAAAATCCAAGAGTCCTTTTGCGAGATTATCTCTATGGCGGGACAAAGAAAAGCTACTATAAGAGGAAGAAGAAAGCCTCCTTTTGCGCATGCATACAACCTCCAACCAGCGGAGATTGA 5070 0.399 MTSLSRSDSNKKYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKLVEEFYRAYRALAERYDHATGVIRQAHRTMAEAFPNQVPPVSTDDLHAVSSVEIGQPHTPDTTGHSHAFSDSDELQKGDSTHETDIALSRKGLKQLNDLFMTGESETNGVNNGSHENDLLSDSDRMSRTETEVLALKISLAKLESEKEDGLIQYQQSLERLSNLESEMSRARENSQGLDDRASQAEAEVQTLKETLDELQSERENSLFQYQQCLDKISNLEKNISSAQKDIGEFNERATRAETEAESLKVDLARLVAQKEAALFQYNQTLETLSKLEEKLVQADENARRTNEQASIAKNEIEDMRLEIGKLIKEKEDAALRYQECLEIISSLEHKLSCVQEESLAQKTVSQSEELSEKQKELGRLWSCVQDEMMRFIEAETAFQTLQNVHSQSQEELKSLAAELHNKVGILERMESHKKALEDEVHKAKEENKVLNDLKLSSSLSMNNLQDEILNLREIIKKLELEVGLQVDERNALQQEIYCLKEELNDVNKRYESTEEEVRSTGLDPQCFSLSVKLLQDENSKLTQTCEAGKDENAALNKKLEIMKMLLEKNANLENSLLVLNSELESLRGMVKVLEENCESLRAEKSTLAAEKATLSYQLQTTAEKLEKLSKKYHILENSLFDVNAELEGLRLKSTILEETCLSLDHEKFSLASEKETLDSQLNMTRQTLKILEKQHSELELQRLELKAERESALQKVEDLLISLYAEREEHSRIVQFNEGHLVEKEFQIHILQEDANYQKKESEEELDRDLRTQIEILILHECIRESEQNNFSLLLEHQRFLEASNMSERLISKLENDNVQKQVDANLLSEKINVLRIALLHVLKTLDNNCEHLPEDNVKEDQKLLNDIHDKLQEKENSFIEVFHENQQMAIENSVLVTFLGQLKLKAKNIATEREALDGELRIQSKQYLALQEDVEKMLEMNQALELTISRGEEKMEVMTTENLMALKELSEELDKLVSVNTNLEERLKVMTGKLEDEQMENSYLKESFVVSNIELKLVESVNDKLNCQIRNDKELLSQKENDILEAAEMFSALQEEEKALQILMVDLKSKYEEAITILEEQGSQILKLSSDKDHQIEVNKKLEAEMRHLQQELGETKLMEKKLSYALLKGADEIEQWESQAAIFYTGMQISTVNETFFEGKVRELADACENLESRCSSNVMESEKLKERVDKLEDENKKLRVQMAAYVPAVSGLNDCITSLEMQTLGQAKPNNSKDSKVKKYVNIKYADGDPRTSVDQNATETDALPDFQDMQKRVNAIEMVIRQMNESFKPRDEMREIQVLKSGISWRQGNAQANKHSTQMDEAKEQYGAVYGHKTRKSLQDIPVTEIEVLPKDIMLDHTSECSSYRISRRGAHKSDEQMLELWETADQDGITGVTVGKAQKVTAPIGYQQRRLSKESKKKYPSVESLIEKELSVDKLEISRSQSRPLLLEGNKRKVLERLDSDAQKLMNLEITVQDLINKMNIIEKTSTVGKGVEYDDVKGQLEAAQEAITKLFDANRRLMKNVEEGTSSFSGKSTTVSDESGSVGSRRVSEQARRGSEKIGRLQLEVQRLQFLLLKLNDYKEGKGKAMIDDQNPRVLLRDYLYGGTKKSYYKRKKKASFCACIQPPTSGD 1689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02581 1689 Gene3D - 194 360 - -
Vifa5g02581 1689 Coils Coil 1078 1112 - -
Vifa5g02581 1689 Coils Coil 1525 1545 - -
Vifa5g02581 1689 Coils Coil 1022 1056 - -
Vifa5g02581 1689 MobiDBLite consensus disorder prediction 124 152 - -
Vifa5g02581 1689 Coils Coil 481 508 - -
Vifa5g02581 1689 Coils Coil 453 473 - -
Vifa5g02581 1689 Coils Coil 224 328 - -
Vifa5g02581 1689 Coils Coil 1232 1259 - -
Vifa5g02581 1689 MobiDBLite consensus disorder prediction 1583 1614 - -
Vifa5g02581 1689 MobiDBLite consensus disorder prediction 1583 1609 - -
Vifa5g02581 1689 Coils Coil 1561 1581 - -
Vifa5g02581 1689 PANTHER PROTEIN NETWORKED 4A 254 350 - -
Vifa5g02581 1689 Coils Coil 983 1003 - -
Vifa5g02581 1689 Coils Coil 336 391 - -
Vifa5g02581 1689 MobiDBLite consensus disorder prediction 173 187 - -
Vifa5g02581 1689 Coils Coil 610 665 - -
Vifa5g02581 1689 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Vifa5g02581 1689 Coils Coil 1148 1175 - -
Vifa5g02581 1689 Coils Coil 729 770 - -
Vifa5g02581 1689 MobiDBLite consensus disorder prediction 173 195 - -
Vifa5g02581 1689 Coils Coil 196 216 - -
Vifa5g02581 1689 Coils Coil 586 606 - -
Vifa5g02581 1689 Coils Coil 516 575 - -
Vifa5g02581 1689 Coils Coil 673 700 - -
Vifa5g02581 1689 Coils Coil 866 886 - -
Vifa5g02581 1689 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Vifa5g02581 1689 MobiDBLite consensus disorder prediction 137 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02581 Vifa-Chr5 859626688 859632411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02581 - - tpra:123889469 2445.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02581 5 859626688 859632411 Vifa5g02581 5 859626688 859632411 ECH
Vifa5g02581 5 859626688 859632411 Vifa3g01405 3 366889305 366894879 PCT