Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02568 ATGCTGCTAAGAAATAGATCAAGAGCAGTGACTAAGCCAAATTTAATGGCTGATCACAGTTCTCAACAATCTTCCAATAATCAAAACTGTGCTAAAAAATCAATCCCACCAAAATTATTCAGAGATTTCACCAACAATACTATTCTCTCAGAAGCTCTGAAAAGTCCAACTTCAATTCTTGACACTAGGATATTACTTTTATCACCTTATGCCTTTGGAAAATCACTTTTTCATGACAAGAAAATCCAAACAGTTTCCAACAAAAATTTCTCATCAAGAAGCATTGGTCTTGCTCTTATAGGTAATGATGATTCAGTTGATGAGAATGATTCTGTTGAACCAAACAAAGGAAATGTTTTGTTTGGAACACAACTTAGAGTTAAAACTCCATCTTTGCCCTCTCCTATATTTTCTCCATTTGATTCTCGGTCTCAAATCAAAACCAAAACCAAAGACTTACCAAATTCTATGTCTTTGAGTGAGATGGAACTTTCTGAAGAATATACGTGTGTGAAATCTCATGGACCTAATCCAAGAACCACTCATATTTTCAATAATCATGTTGTTGAAGAGAGTTATTGTTGTTTGCCACAAAAATCTAACTCATCTTATGGTAGTTTCCTTAGAGTTTGTTACACTTGCAAGAAACATCTTGAGCAGACAAAGGACATCTTTATCTATAGAGGGGAGAAAGCTTTTTGCAGTAAAGAATGCAGGCACAGAGAAATGGTGATAGATGGTGTAGAAAGTTTAGAAGAATTTGAAAGTACTAATGCTTAA 780 0.3436 MLLRNRSRAVTKPNLMADHSSQQSSNNQNCAKKSIPPKLFRDFTNNTILSEALKSPTSILDTRILLLSPYAFGKSLFHDKKIQTVSNKNFSSRSIGLALIGNDDSVDENDSVEPNKGNVLFGTQLRVKTPSLPSPIFSPFDSRSQIKTKTKDLPNSMSLSEMELSEEYTCVKSHGPNPRTTHIFNNHVVEESYCCLPQKSNSSYGSFLRVCYTCKKHLEQTKDIFIYRGEKAFCSKECRHREMVIDGVESLEEFESTNA 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02568 259 PANTHER FCS-LIKE ZINC FINGER 8 3 249 IPR044593 -
Vifa5g02568 259 ProSiteProfiles Zinc finger FLZ-type profile. 206 250 IPR007650 -
Vifa5g02568 259 MobiDBLite consensus disorder prediction 14 32 - -
Vifa5g02568 259 MobiDBLite consensus disorder prediction 1 32 - -
Vifa5g02568 259 Pfam zinc-finger of the FCS-type, C2-C2 202 246 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02568 Vifa-Chr5 853822784 853823796 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02568 - - gmx:100800416 247.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02568 5 853822784 853823796 Vifa5g02568 5 853822784 853823796 ECH
Vifa5g02568 5 853822784 853823796 Vifa3g01413 3 369437388 369438209 PCT