Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g01413 ATGCTGCTTAGAAACAGATCAAGAGTTGTAACCAAACAAACACTGATGGGTGAACAATCACCACCAACTCAAAACTTCACTACTACAATCCCATCTCTATTTGGTTCATCAAACTATAGAGATTTTCATTTCACTTCCAAAAGAATTGAATCTTTGATAAGTCCGACATCGATTCTCGACACAACAAAAGCTTTAACTCGGTTTGAGAATCCTTTCTCAGTTAACAATAGGAACAACAACAAAGTTTGTAGCTCAAGTGAGAAACTAGATTCAAACATCATAGGACTTGGTCTTGTTGGTGTTCTGAAAGATGAACCGTTTCATCAAAATTCTGAAAAACTAACAAAAAAAGTTTTGTTCGGAACTGATCAGCTTAGAGTGAAAATTCCTTCTCTACCAACTTCCACGTTTGAGTCAAAAAGTGATTTTTGTTGCAAAATGAATGATTCTTCTCAAAAGGGTGTTCTTAGTTTGAGTGAAATGGAGGTTTATGAAGAATACACATGTGTGATATCTCATGGTGCAAATCCAAAAACAACACATATATTTGATAATTGTGTTGTGGGAAGTTACTCTTCTGTCCCTAATAGTCCTCACTCTTTTTCACTCAATTTTCTTAGCTTTTGTTACACTTGCAAAACTCATCTTCAGCATACAAAAGACATCTTCATTTACAAAGGAGAAAAAGCTTTTTGCAGTCAAGAATGTCGTAACCAAGAGATGATGTTAGATGAAGAAGAAAATTAA 747 0.3454 MLLRNRSRVVTKQTLMGEQSPPTQNFTTTIPSLFGSSNYRDFHFTSKRIESLISPTSILDTTKALTRFENPFSVNNRNNNKVCSSSEKLDSNIIGLGLVGVLKDEPFHQNSEKLTKKVLFGTDQLRVKIPSLPTSTFESKSDFCCKMNDSSQKGVLSLSEMEVYEEYTCVISHGANPKTTHIFDNCVVGSYSSVPNSPHSFSLNFLSFCYTCKTHLQHTKDIFIYKGEKAFCSQECRNQEMMLDEEEN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g01413 248 ProSiteProfiles Zinc finger FLZ-type profile. 204 248 IPR007650 -
Vifa3g01413 248 PANTHER FCS-LIKE ZINC FINGER 8 3 247 IPR044593 -
Vifa3g01413 248 Pfam zinc-finger of the FCS-type, C2-C2 202 246 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g01413 Vifa-Chr3 369437388 369438209 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g01413 - - mtr:11434150 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g01413 3 369437388 369438209 Vifa3g01413 3 369437388 369438209 ECH
Vifa5g02568 5 853822784 853823796 Vifa3g01413 3 369437388 369438209 PCT