Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02518 ATGGTGCACACACTCTCTCTAATGGCTTCTCACATCTATCCTTCACCCCTTGCCTTCCCCACAACACATGTCAAGGAGTGTCAAACTTTTGCACCTTCTTCTTTAGCAAAACCAGATATGCTCAATTATCAGTATCCTTTTCTTAACTCAAGTCCATTTGGAGAGCCCGTTAAAACCCGAAAAAATTGGTTTGATGAAACTCAGTTCGTCAATGTTGATTCCTCGCCCCAATGGCATGTATCAATTGATGCACAAGAATCCTGTTCAAATGCAGTACTTTTAGGCTTTGGCATTGTTGAGCAATGTACTAAGCATGATACAGTTTCAAATCTCCTAAAATCGGGAACTGCTGAGTCACGGGTAGATGGTGCAAATATATCCTTGTTATTAGACTTGATGAAATTGCAGTTGTCAGCCATTAATGAACCTCAACAACCATTCTCATCTGACTCGTCGTCTCTTTTATACCTTAATGACAAATTCAACATCAAGAAACCTTTTCTGTATTTTCTTCAAGATTCCGCACTTACTTCAAAGGTTACGGTTCATCTTGATGGCCAAATCACATTTATGGGTGCTGAAATTCAGATGAAAGATCTTCTTTCTGTAGTTGCTGAGTCATATTTGTCAAAGAGATTACATAAGGGTGAAAAGCTCTCAGTGCTTGTTCCACACTTCAGCAGGGTGAATATCGGTGAAGCAGAAGTACAGAGTCATTCATCTACAATGAAGATCAAATCTACCTTAACCGCTCCTTTAAGGAGTCCTGAGAAAGTCAAACTCAAACCATCAAAAAAGAAGAATAAGAAAATCAACAGAGAAAGAGATATCTACAAAAACTATTCACATGCATGTGAGAGCCTTCTGTCCTTGATGGTCAACAAGAAACAAAATCGAAAAACAATAATTCCTTCACTGAAGAAATCCGGCCCCGAGCTTCCTGAGCTTCTTATGCAAATTTCTGCTGGGATTGCTGGGACTGGCCTTGCTGTCCTACTATCTGTCATGTGTAAGCTAGCTTGTGGAAGGGTTCTTCTCTCTGCATCCAGCTTTTTCAGTACCGGGTTGGGATTTGGGTTGGTTTGGCTTTCTTGGATAGTAAGTAAGCTAAGGGCCACAATCTTTAGCATCAGCAAGAATGCAGGAAAGCCGGGTTTGAAAGAAGAGGTAATGATTCAGAAACTCGATAAGAGGATTAGAGATATTTACTTCGGCTCCGCAGCAATTCTAGCAGTGGCAGTGCTAAGTATTGCTTGA 1257 0.4065 MVHTLSLMASHIYPSPLAFPTTHVKECQTFAPSSLAKPDMLNYQYPFLNSSPFGEPVKTRKNWFDETQFVNVDSSPQWHVSIDAQESCSNAVLLGFGIVEQCTKHDTVSNLLKSGTAESRVDGANISLLLDLMKLQLSAINEPQQPFSSDSSSLLYLNDKFNIKKPFLYFLQDSALTSKVTVHLDGQITFMGAEIQMKDLLSVVAESYLSKRLHKGEKLSVLVPHFSRVNIGEAEVQSHSSTMKIKSTLTAPLRSPEKVKLKPSKKKNKKINRERDIYKNYSHACESLLSLMVNKKQNRKTIIPSLKKSGPELPELLMQISAGIAGTGLAVLLSVMCKLACGRVLLSASSFFSTGLGFGLVWLSWIVSKLRATIFSISKNAGKPGLKEEVMIQKLDKRIRDIYFGSAAILAVAVLSIA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02518 418 PANTHER OS05G0143300 PROTEIN 4 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02518 Vifa-Chr5 834060181 834063967 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02518 - - gmx:100777424 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02518 5 834060181 834063967 Vifa5g02518 5 834060181 834063967 ECH
Vifa5g02518 5 834060181 834063967 Vifa3g02296 3 581321508 581324636 PCT