Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02296 ATGATGCAGAAATTCTGTTTGATGGCTTCTTATGGATTTGCTTCGGAGATTGGTTGCCAACAAGAATTTGTTATGAAGGGTTGTCAACAATTGGTGCCTTATCATGTAACAAAACCGGAAATTGTTCGATATCAGTGTCCTAATCTTAGGTTGAGTTCATCCGAGGAATTGAGAATGACATCGAAAGAGTGGTTTGGTTCTAATCAGTTTGTCAATTTGGAGTTGTCAGCTCTAAAGCCAATGGTTATTGATGTGCAAGCAACTTGTCCAAATGAACTTTTCGGCTTTGGTGCCGTTGATCAATGCACTGAGCATGATAAAACTTTGCATTGCATCACATCTGAGGCTGCTGAAGCAGATGGCCAAGTCACATTTATGGGTACAGAAATTGAGATGAAGGATTTTCTTGCTTTAGTTGCCGAGTCATACTTATCAGAAAGCACACATAAGGGTGAAAAACAGTCTATGCTTGTTCCACACTTCACTTGGCTGAATATAAATGAAGTAGAGGCCAGAAGTCATCCCTCTACATTGGATATTCACTCTACACTGACTGTTCCTTTAAAAAGTCCTGAGAAAGTCAAAGTCAAGCAGTCGCGAAAAAAGAACAAGAAAGTCCCCAGGGAGAGGGATCTGTTTAAGAAGAACTACATTCATGCATGTGAAAGCCTTCTGTTTTTGATGACTGATAAAAGTCATCATCGGGAAACAGCAATTCTTGCCCTGAAGAAATCTGGCCCAGAGCTTCCTGAACTCCTCACCCAATTTTCTGCCGGCATTGCTGGTACTGGCCTTGCTCTTGTGCTATCTGTGATCTGCAAGCTAGCTTGCGGAAGGGTCCCCTTTTGTGCTTCTAAGGTTTTCAACACGGGTTTGGGTTTCGGGCTGGTTTGGCTTTCTTGTGGAGTAAATAAACTGAGGAATACAATTGTTAACATAAGCAAGAATACTGGAAAGAAGGGATTGAGAGATGAAGATGTGATACAAAAGGTGGATAAGAGCCTAAAAGAGGTTTACTTTAGAGCTGCAGCATTGCTAGTAGTGGCAGTGCTAAGGCTTGCTTGA 1065 0.4178 MMQKFCLMASYGFASEIGCQQEFVMKGCQQLVPYHVTKPEIVRYQCPNLRLSSSEELRMTSKEWFGSNQFVNLELSALKPMVIDVQATCPNELFGFGAVDQCTEHDKTLHCITSEAAEADGQVTFMGTEIEMKDFLALVAESYLSESTHKGEKQSMLVPHFTWLNINEVEARSHPSTLDIHSTLTVPLKSPEKVKVKQSRKKNKKVPRERDLFKKNYIHACESLLFLMTDKSHHRETAILALKKSGPELPELLTQFSAGIAGTGLALVLSVICKLACGRVPFCASKVFNTGLGFGLVWLSCGVNKLRNTIVNISKNTGKKGLRDEDVIQKVDKSLKEVYFRAAALLVVAVLRLA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02296 354 PANTHER OS05G0143300 PROTEIN 2 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02296 Vifa-Chr3 581321508 581324636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g02296 - - gmx:100800200 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02296 3 581321508 581324636 Vifa3g02296 3 581321508 581324636 ECH
Vifa5g02518 5 834060181 834063967 Vifa3g02296 3 581321508 581324636 PCT