Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02507 ATGGCGGCTATCCAAGAATCCCAGGCGGATCAACCGAAAACGGCGCCGTTGCCGTTGCCGTTGCAGTCTCAGTTGCCCCCGCCGTTGTTAGTCTCCGACGCGTTTGCCAAGGACGCCATTCTCGCATGGTATCGCGGCGAGTTTGCCGCTGCGAACGCGATCATCGACGCTCTCTGCGGTCATCTCGCGCAGATGCAGAAGTATCACTCCATTGCTGATGTCACTCTTGAACTGCGTAATGTTGCTGAGAAGAAAATCGAATCGGTTGATGGAAAAGCGAAAAGCCTAGATGAGAAGCCGGAAGTGAATGAGGAAGCTGTGGAAAACGTCGGAAATGACGGCGATGGCGCTCCGGCGGAGTATGATTCGCCGGACAGTGAGATCACTAATTCAGGATCGCTAGAAGTGCAACACACTTTTATGATCAATAGTATATGTTCAAATCATGAAGAATGTGAAGGACGTCCTTCAGAGATAAAGTTGACACAAGGTTTCACAACAAAGGAATTCGTAAAGGGGCATCCGGTGAATGCTGTGAAAGGATTGAGGTTGTATGAGAATGTTTTTTCTGAATCACAACTCTGCAAGCTGAATGATTTTGTGAAAGAGATCCATGCTGCTGGCCAGAACCGAGAACTTTCAGGTGAAACTTTTATACTATTCAACAAACAGGTGAAGGGGAACAAGAGGGAGCTGATTCAGTTAGGTGTACCCATATTTGGACAGATAAAAGACAATGCCAAAAGCGAAATTGAGCCAATTCCATCATTTCTTCATGGTGTCATTGATCACCTTATTCAGTGGCAATTGATTCCAGAGTACACAAGGCCAAATGGTTGCATTATCAACTTCTTTGAAGAGGGGGAGTTTTCTCAGCCATTCTTGAAACCGCCACATTTGGAGCAGCCTCTATCTACCCTTCTTCTCTCTGAATCTACCATGGCTTTTGGGCGTATTCTTATGAGTGAAAATGATGGGAATTACAAAGGTCCACTCATGCTATCTTTGAAGCAAGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCATGTGATGTGTCCATCCCCTAACAAAAGGGTGAGTATCACCTTCTTTAGAGTGAGAGAAGGCTCTTATCAAGGCCAATCTACAAGCCCTCCAACGACGACATCCGCGATGACAGTTTGGCAACCTGGCCCTGCCAGCCCACTTGCTTTGCCAAATGGGGCGATAACTGGCCACCAGGCTATGGATATGATACCTAGATGGGGTATGTTTGGTCCTCCAATGGTCATGCTGACCCCTATGCACCCTATGACAATGAATCCCAGCAAACTTCCTCGAGGCGGGACTGGAGTTTTCTTGCCTTGGAAGGGGCATCCCAGGAAACATTCAAGGTATCTTCCACCTCGTGCCCATAAAGGACGGGTTATGGCATTACCTTCCCCGGTTGAATCACACAGGGAAGGATCTACTTCTGAACCCACCATTACTGTTGAAGCCTGA 1497 0.4756 MAAIQESQADQPKTAPLPLPLQSQLPPPLLVSDAFAKDAILAWYRGEFAAANAIIDALCGHLAQMQKYHSIADVTLELRNVAEKKIESVDGKAKSLDEKPEVNEEAVENVGNDGDGAPAEYDSPDSEITNSGSLEVQHTFMINSICSNHEECEGRPSEIKLTQGFTTKEFVKGHPVNAVKGLRLYENVFSESQLCKLNDFVKEIHAAGQNRELSGETFILFNKQVKGNKRELIQLGVPIFGQIKDNAKSEIEPIPSFLHGVIDHLIQWQLIPEYTRPNGCIINFFEEGEFSQPFLKPPHLEQPLSTLLLSESTMAFGRILMSENDGNYKGPLMLSLKQGSLLVMRGNSADMARHVMCPSPNKRVSITFFRVREGSYQGQSTSPPTTTSAMTVWQPGPASPLALPNGAITGHQAMDMIPRWGMFGPPMVMLTPMHPMTMNPSKLPRGGTGVFLPWKGHPRKHSRYLPPRAHKGRVMALPSPVESHREGSTSEPTITVEA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02507 498 Gene3D - 165 376 IPR037151 -
Vifa5g02507 498 MobiDBLite consensus disorder prediction 1 20 - -
Vifa5g02507 498 MobiDBLite consensus disorder prediction 89 128 - -
Vifa5g02507 498 SUPERFAMILY Clavaminate synthase-like 170 371 - -
Vifa5g02507 498 MobiDBLite consensus disorder prediction 483 498 - -
Vifa5g02507 498 MobiDBLite consensus disorder prediction 89 106 - -
Vifa5g02507 498 MobiDBLite consensus disorder prediction 478 498 - -
Vifa5g02507 498 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 122 485 IPR044842 GO:0003729|GO:0006402|GO:0032451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02507 Vifa-Chr5 831528800 831533214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02507 K10767 - gmx:100796344 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02507 5 831528800 831533214 Vifa5g02507 5 831528800 831533214 ECH
Vifa5g02507 5 831528800 831533214 Vifa3g02292 3 578258273 578262555 PCT