Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g02489 ATGCCACCAATATCGTCCAGGATTGAACAATTCACTCATGTCGCATCTACGCAATCTAATTCTGTTTCTGTTAACGGATTTTGGTCTAACAATTGTGGCGACGTTAGCTACAATCAGCTTCACAAGTTTTGGATTGAATTGTCACTACAAGCTCGGCAAGAACTCCTTAGGATTGACAAGCAATCCCTTTTTGAGCATGCTCGTAAAAATATGTACTGCTCCAGATGCAATGGATTGCTTCTTGAAGGATTTTTGCAAATTGTTATGTATGGGAAGTCTTTGCAGCAAGAAGGGGTGGGTGCTCAATTTCCTTGTAACACACTTGGAGGTTTGAAAAAGCAAACTAATGGTGGATCAAGCTTTATAAAAGGGTGCCAAGATGAAATTCCAGATCCATCTGTCCATCCTTGGGGAGGCCTGACCACAACGCGTGAGGGCTCATTAACGCTTATGACCTGCTATTTGTATTCAAAATCTCTAAAAGGATTGCAAACTGTTTTTGATGGCGCACGTGCTAGGGAGCGAGAAAGAGAACTGCTTTATCCTGATGCATGTGGTGGGGCAGGCCGAGGTTGGATTAGCCAAGGCATAGTGAGTTATGGCAGAGGACATGGAACAAGAGAAACATGTGCCTTGCACACTGCCAGACTTTCATGTGATACACTGGTAGACTTTTGGTCAGCGCTTGGAGAGGACACTCGATTTTCTCTTCTAAGGATGAAGGAAGAAGATTTTATGGAGAGACTTATGTTCAGGTTTGATAGCAAGAGATTTTGCCGAGATTGTAGAAGAAATGTTATCCGAGAATTCAAGGAACTAAAGGAACTGAAACGCATGCGCAGAGAACCTCGTTGCAGCAGCTGGTTTTGTGTTGCCGACTCAGCCTTTCAGTATGAGGTATCTGACGACTCGGTTCAAGCTGATTGGCGTCAAACATTTCCCGATACTTTGGGAACCTACCATCATTTTGAGTGGGCTGTGGGCACAAGTGAAGGAAAATCTGACATTTTGGAATTTAAAAGTGTTGGATTGAACGGATGTGCCAAAGCCAGCAGCCTTGATCTTGGTGGTTTGAGTGCTTGTTTCATCACTCTCCGAGCTTGGAGATTAGATGGACGCTGTTCTGAACTTTGTGTTAAGGCTCATTCGTTGAAAGGTCAACAGTGTGTACATTGCAGATTAATTGTAGGAGATGGTTATGTCACAATTACGAAAGGGGAAAGTATCCGAAGATTCTTTGAGCATGCTGAAGAGGCTGAGGAGGAAGAGGATGATGATTCAGTTGATAAGGATGGAAACGATCTTGATGGAGAATGCTCTCGTCCCCAAAAGCACGCAAAAAGCCCTGAACTGGCTCGAGAATTTCTGCTAGATGCTGCTACTGTTATTTTTAAAGAGCAGGTTGAAAAAGCTTTCAGAGAAGGAACAGCCCGTCAAAATGCACACAGCATATTTGTCTGTCTTGCACTAAAATTGCTGGAGGAACGAGTGCATGTAGCATGCAAAGAAATCATTACATTAGAAAAGCAGATGAAACTTCTTGAAGAAGAAGAAAAAGAAAAACGCGAAGAAGAAGAACGTAAAGAGAGGAGAAGAACAAAGGAAAGGGAGAAAAAACTTCGGAGGAAGGAAAGACTAAAAGGAAAGGAAAAAGACAGAGAAAAAACATGTTCTGAATCAACTGATATTATCGGTTCTTCAGAAATCTCAAAAGAAGAATTAGCTGCACATACTGATATGGATCAAAATAATCTTATTACTGGTGGGAATTCAGTTGTTGAAACAGATGAAGTCAATCATAGCGACGATTCTGCTAACATCCAAGATAAAGAACTCTCCAGTGAGAATGATACTGTGAGAACGCAACATCTCTCTGATGATGATTGTGATGGAGAAAATATCAATACAAATGACGAGATAGGTCAGCAGTCTACGGTTGAACAATCAATGCTTTCTCATCAAAGACTGAGATACAGGAAAGAATTTCCACCGGATGAGATGCCTATCAAGTGGTCTGACAGACGCCAATATGCCACTGTTTCTGACAATGGTGGGATGGTTGGTAAAACCGAATCAAGACATTATGGAGAGAGTATGTTGACATCATCGAGGGTAGTTAATAGATTGAATAGGCAATCCAGGATAAGTGTTCCTGCAAAGACCAATGGTCGAAATGTTAGTCCGAAGCATGGCGAGAAATTTTACAACCGGATGAATGACAGATGTGATATTCATTCTTGCAGCTGTAGTCCAAATAGTGAATATAAGATGAGAGTTGAGCAACATTCTCCTGTGACAAGAGTTAGTCGGGAGTCAAAACCTCCTAGTCAATATGAATCTGCTAAGCCGTTTTATCGAGGTAGTAAGTATAATCAAGTAGACTATATGCATGAGAATAATGGAAGAAACAAAAGCAAAATCATTTCGGCGAACTATCCCAGCAGGGATTTGTTTCAATCAAAAAAGGTTTGGGAGCCTACGGAGTCTCTGAAGAAATATCACCATAGTAATTCAGACTCTGGTCTTATTTTGAGGTCCACTGAACTTCAAGAAGCTCAGCCTGGGGAAATTGTAGATTCTGGTGAAAATGATTATAATGACTGTAATTCAAAGCATTTAAGTAGAATTGATACAGGCTGTCAAAATGATTTTCAGGTTAAAGGCGAAGGTTCTTGTAGCTCTAAGGAAATTGCTTCTGAGGAATCTGGAATATGCCCAACTGGGGGCTCTGTCTTGAACAATTCTTCCGATCCTACCCAAAGTAGCTCTGACAGCTGCTCATCATGTCTAAGTGAGGGCGACAATAATACGTCATCAAACCGTGAAAATCAAGAATCCTCAACCACATCAGATTCTGAAGATGTTAGCCAACGATCTGAAATTAGAGATAATTCAGCTTGTGTGAAAAACATGCTGTCTGATTGTCATGAAACTGCCATGGAGAATAACCAGACTGCAAATGGTGAGAGTCTGTCCAGAAGTTCAAATTCACTTATTGGCCCATCCTTGGATGGAAGAAGAAGTGATGCATTTGAGAGTTCTGTGGAAATTGCCCAAAATTTTAATAATGGGTTTTCCACCACTAATGTGAGTACTCAACCTCAAAGCATGCTTCCCCCAGCATCAAATCAAAATATTCAATTTCCTTCCTTTCAAGCTCCTTCAACAATGAGTTATTTCCATCAAAATCCAGTTTCATGGCCAGCAGCTCCCACAAATGGTTTGATGCCATTCTCGTACCCAAGTCATTACTTGTTTGCAGGCCCTCTTGGATATGGCTTAAATGAAGACCCACACATTTGTTTGCAGTATGGTTCCTTGCAGCAACAAACCCCCTCGTTTAACCCTGCCATTCCAGTTTATCAGCCAGTTGCCAGAGCTAATGTCTTAAATTCAGAGGAATGGACACGAGTTTCCAAGCCAGCTTCCTTGCAGGAACATACTAACGGATCTATTGCAGAAAGGATTGTTTCATCCGGAAACAATTTGAAAAAACCGGCATTCAATGGAGAAATTAAACATGATCATTCTGCCAAGTCACAAGAGAATAACGGTGACTTTTCCTTGTTTCATTTTGGCGGGCCTGTAGCCCACTCAACAGGTTGTAAATTGACTCATGCTTCTTCAAATGGCGATACCGTTGGTGATTTTAGCCTGAAAAGTTCAGCGGATCATGCCGAAAAGGTCCATACTTGCAATAAGAAAGATATCACTACCATGGAGGAATACAGTTTATTTGCTGCAAGTAATAACTTAAGGTTTTCAATTTTTTAA 3774 0.412 MPPISSRIEQFTHVASTQSNSVSVNGFWSNNCGDVSYNQLHKFWIELSLQARQELLRIDKQSLFEHARKNMYCSRCNGLLLEGFLQIVMYGKSLQQEGVGAQFPCNTLGGLKKQTNGGSSFIKGCQDEIPDPSVHPWGGLTTTREGSLTLMTCYLYSKSLKGLQTVFDGARARERERELLYPDACGGAGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEDTRFSLLRMKEEDFMERLMFRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCSSWFCVADSAFQYEVSDDSVQADWRQTFPDTLGTYHHFEWAVGTSEGKSDILEFKSVGLNGCAKASSLDLGGLSACFITLRAWRLDGRCSELCVKAHSLKGQQCVHCRLIVGDGYVTITKGESIRRFFEHAEEAEEEEDDDSVDKDGNDLDGECSRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQMKLLEEEEKEKREEEERKERRRTKEREKKLRRKERLKGKEKDREKTCSESTDIIGSSEISKEELAAHTDMDQNNLITGGNSVVETDEVNHSDDSANIQDKELSSENDTVRTQHLSDDDCDGENINTNDEIGQQSTVEQSMLSHQRLRYRKEFPPDEMPIKWSDRRQYATVSDNGGMVGKTESRHYGESMLTSSRVVNRLNRQSRISVPAKTNGRNVSPKHGEKFYNRMNDRCDIHSCSCSPNSEYKMRVEQHSPVTRVSRESKPPSQYESAKPFYRGSKYNQVDYMHENNGRNKSKIISANYPSRDLFQSKKVWEPTESLKKYHHSNSDSGLILRSTELQEAQPGEIVDSGENDYNDCNSKHLSRIDTGCQNDFQVKGEGSCSSKEIASEESGICPTGGSVLNNSSDPTQSSSDSCSSCLSEGDNNTSSNRENQESSTTSDSEDVSQRSEIRDNSACVKNMLSDCHETAMENNQTANGESLSRSSNSLIGPSLDGRRSDAFESSVEIAQNFNNGFSTTNVSTQPQSMLPPASNQNIQFPSFQAPSTMSYFHQNPVSWPAAPTNGLMPFSYPSHYLFAGPLGYGLNEDPHICLQYGSLQQQTPSFNPAIPVYQPVARANVLNSEEWTRVSKPASLQEHTNGSIAERIVSSGNNLKKPAFNGEIKHDHSAKSQENNGDFSLFHFGGPVAHSTGCKLTHASSNGDTVGDFSLKSSADHAEKVHTCNKKDITTMEEYSLFAASNNLRFSIF 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 604 646 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 604 630 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 902 954 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 433 447 - -
Vifa5g02489 1257 Coils Coil 490 543 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 416 447 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 516 533 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 418 432 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 902 963 - -
Vifa5g02489 1257 PANTHER OS10G0105400 PROTEIN 12 994 - -
Vifa5g02489 1257 MobiDBLite consensus disorder prediction 516 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g02489 Vifa-Chr5 823279744 823286772 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g02489 - - gmx:100813046 1791.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g02489 5 823279744 823286772 Vifa5g02489 5 823279744 823286772 ECH
Vifa5g02489 5 823279744 823286772 Vifa3g00685 3 135152849 135158538 PCT