Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g00685 ATGAAGGAAGAAGATTTTATTGAGAGACTCATGTTCAGGTTTGATAGCAAGAGGTTTTGCAGAGACTGTAGAAGAAATGTTATTCGAGAATTTAAGGAGCTAAAAGAACTTAAGCGCATGCGTAGAGAACCTCGTTGCACCAGTTGGTTTTGTGTTGCTGATACTGCCTTTCAGTATGAGGTATCAGATGACTCAATTCAAGCTGATTGGCGCCACACATTTGCAGATACTGTGGGATCGTATCATCACTTTGAGTGGGCTGTGGGTACAACTGAAGGAAAATCAGACATTTTGGAATTTGAAAATGTTGGAACGAGTGGATGTGTTCAAGCTAGTGGCTTAGATCTTGGTGGCTTGAGTGCATGCTTTATTACCCTCCGAGCTTGGAAACTAGATGGACGGTGTACTGAGTTTTGTGTTAAAGCTCATGCATTGAAAGGTCAAGAGTGCGTACATTGCAGGCTTATTGTAGGGGATGGTTATGTTACAATCACAAAAGGAGAAAGTATAAAAAGATTCTTTGAGCATGCTGAAGAGGCAGAAGAAGAAGAGGATGATGATTTGATGGACAAAGATGGGAATGACCTCGATGGAGAATGCACCCGTCCGCAAAAGCATGCAAAAAGCCCTGAACTTGCTCGAGAGTTTCTTCTAGATGCTGCTACAGTTATATTCAAAGAACAGGTAGAAAAGGCTTTCAGAGAAGGAACGGCTCGTCAAAATGCGCATAGCATATTCGTTTGTCTTGCACTAAAACTGCTGGAGGAACGAGTTCATGTTGCATGCAAAGAGATCGTTACATTAGAAAAGCAGACAAAACTTCTTGAAGAGGAAGAAAAGGAAAAACGTGAAGAAGAAGAGCGCAAGGAGAGAAAAAGAGCAAAAGAAAGGGAGAAAAAGCTTAGGAGAAAGGAAAGACTAAAAGGAAAGGATAAAAATAAAGAAAGAAATTGTTCCGAGTCAGTTGATGTTCCTAGCTCTCCTGAAGCCTCAAAGGAAGAAATGTCTGCACCGGTTGATTCAGAGCAAAATAATGCTATTAGTATTACATGCATGAATTCAGGTAATGCAACCGATGAGGCTAATTTATCACAGTGTGATTACCCTAACATCCAAGATGACGACTTCTCAAGTGAGTGTAGTACTCTCAGAGCACAAGAATGTGCTTATGGTGACTATGATGGAGACATTGCAAATGCACATGACAGCAATGATACTTTTATAGTTGAGCAACCAAAGTTTTATCATCAAAGGCTTAGATATAGGAAAGATTTTCAAGCTGACATGTCTTCAAAGTGGTCTGACAGATCTGAGCCAAGACACTATGGCGATAATTTTGGAACATCTTCCAGGGGAATCAATGTATTGAACCGGCAATCAAAAATAAGTGTTCCGAAAACCAGCGGTCGTAACATTGGTCATAAGTGTAACAGTTCCAACTACCGGATGAGTGAAAAATATGATTTCCATTCATGCAGTTGTAGCTTGAATAATAGAATGACCAGAAGTAGTTGGGAGATGAAAGCTGCTAGTAAGTCGGAATCTACTGTAGATACATCTAGGCAGTTTTATCGTGGTAGTAAGTATAATCAGGTAGACTCAATGCATGAGAGTAGCGGAAGACCCAAAAGCAGAGTCTTCTCGGGGAACTATTTTCAATCAAAGAAAGTTTGGGAACCTACGGAATCTTTCAACAAGTATTCTCGTAGTAATTCAGACTCTGATGTTACATTGAGGTCCACAGATCAGGTATGTCAGTTCGATCCGGTCAAGTCCCCTGTTGACGAAGTTGACGATTCAGGTGAAATTGACAATGATAGTAGTGATTTGAAGAGAAGTGGAATGACCGAAGGCTGCCAGAATGATCTTGATGCAGAAGCCGAAGGATCTTGCAGCTCCATAGAAACGAGGAGATCTACCATAAATAATTCTTCTGATCACAGTCAAGAATCTTCAAATTCAGATTCTGAAGATGCTAGCCAGATATACGAGGTAGGAGATAGTTCAGTCCGTGATGACAATGATTTGTCTGGCTGTTATGAACATGGGATCAAGAAAACTCATAACACAAATGGTGATGGTGTGTCGAGCAGGTCGCAATCTGTTCCATCCTTAGATGTAGCAGAAAGTGAATCGTTTCGTAATCCTGTGTTAGAAACAGCCCAAAATTTTGAAAATGGTACCGTCCAAAAATTTGAAAATGGGTTTTCTTCCACCAATGTATGCTCTCAACCTGAAGGCATGCCTCCTCCAATGGCAACAAACAGAAACGTACAATTTCCTGTGTTTCAGACTCCCTCGGCAATGAGTTATTACCATCAAAATCCAGTTCCATGGCCGCCAGCCGCTCCAACAAATGGGTTGGTGCCCATTCTACACCCAAATCAGTATTTGTATGCAGGCCCTCTTGGATATAACTTAAACGAGGATCCACGCTACTGCTTGCAGTATGGTTCCTTGCAACAACCGACACCACAATTCAACCATGCTGCTATTCCAGTTTATCATCCAGTTGCGAGAGCTAAGGGCTTAAATGGAGAGGAACTTCCAGTTTATCATCCAGTTGCGAGAGCTAAGGGCTTAAATGGAGAGGAACTAAGTCAAACATCTAAGCCATCATCTATGCAAGATCATCTGCATGAATCTATTGGAGAAAGGTTTGTTCCAAATGCAGCTAATTCCAGAAAAGCAGTACCGAACGGGGAAGACCGACGTGGACATGGCAATTCTGCCAAGTCACAAGATAGTTACAATGGCTTCTCATTGTTTCATTTTGGCGGGCCAGTAGCCTTTTCAAATCAATGCAAAAGAGCGGCTGCATCTTCAGACTATGTTGGAGATTTTAACTCAAAAAGTTTTCCAGATCAAGTCGAAAAAGATCATGGTTGCAATAAGAAAGAGAATGCTTTCATAGAGGAGTACAATTTGTTTGCGGCGAGTAATACCTGGTTCACAATTTTCTAA 2964 0.4126 MKEEDFIERLMFRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTAFQYEVSDDSIQADWRHTFADTVGSYHHFEWAVGTTEGKSDILEFENVGTSGCVQASGLDLGGLSACFITLRAWKLDGRCTEFCVKAHALKGQECVHCRLIVGDGYVTITKGESIKRFFEHAEEAEEEEDDDLMDKDGNDLDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIVTLEKQTKLLEEEEKEKREEEERKERKRAKEREKKLRRKERLKGKDKNKERNCSESVDVPSSPEASKEEMSAPVDSEQNNAISITCMNSGNATDEANLSQCDYPNIQDDDFSSECSTLRAQECAYGDYDGDIANAHDSNDTFIVEQPKFYHQRLRYRKDFQADMSSKWSDRSEPRHYGDNFGTSSRGINVLNRQSKISVPKTSGRNIGHKCNSSNYRMSEKYDFHSCSCSLNNRMTRSSWEMKAASKSESTVDTSRQFYRGSKYNQVDSMHESSGRPKSRVFSGNYFQSKKVWEPTESFNKYSRSNSDSDVTLRSTDQVCQFDPVKSPVDEVDDSGEIDNDSSDLKRSGMTEGCQNDLDAEAEGSCSSIETRRSTINNSSDHSQESSNSDSEDASQIYEVGDSSVRDDNDLSGCYEHGIKKTHNTNGDGVSSRSQSVPSLDVAESESFRNPVLETAQNFENGTVQKFENGFSSTNVCSQPEGMPPPMATNRNVQFPVFQTPSAMSYYHQNPVPWPPAAPTNGLVPILHPNQYLYAGPLGYNLNEDPRYCLQYGSLQQPTPQFNHAAIPVYHPVARAKGLNGEELPVYHPVARAKGLNGEELSQTSKPSSMQDHLHESIGERFVPNAANSRKAVPNGEDRRGHGNSAKSQDSYNGFSLFHFGGPVAFSNQCKRAAASSDYVGDFNSKSFPDQVEKDHGCNKKENAFIEEYNLFAASNTWFTIF 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g00685 987 MobiDBLite consensus disorder prediction 689 708 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 632 663 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 592 611 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 276 344 - -
Vifa3g00685 987 PANTHER OS10G0105400 PROTEIN 3 505 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 883 913 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 276 294 - -
Vifa3g00685 987 Coils Coil 251 304 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 563 582 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 588 708 - -
Vifa3g00685 987 MobiDBLite consensus disorder prediction 668 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g00685 Vifa-Chr3 135152849 135158538 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa3g00685 - - gmx:100776127 1192.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g00685 3 135152849 135158538 Vifa3g00685 3 135152849 135158538 ECH
Vifa5g02489 5 823279744 823286772 Vifa3g00685 3 135152849 135158538 PCT