Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01994 ATGGCTTCTTTTCTTTCCTTATCTCTTCCCAAACTAAACTTGATAAAAGCCTCTTCAGCTGCTACAACTACAACACCTCTTTCAACTCCCGAGGCACTCAATGAGAAATTTGGAAGAAAAGGCATCAAATTCTTGGAGACTAATAGCATTCCCATTGTTGAGTTGACGGTTAGAAATGGAAGCTCATTGAGCCTAAGATTACCTGATGCTCATGTAACATCTTACAAACCAAAAGTGTTTTGGAAAGACGATGGATTCGAGGAATTTCTTTACACAATTCCAGCTAGTGAAACAGGTCTTTATAAAGCTAAAGGTGGAATTGGTTTGGTCTTGAATGAAGTGTTACAACCTGGCGCGAAAGAGTTGCTTCCTTCTACGCTAGAATGGACTGTAAAGGATGTTGATTATGATGCCATTGATGCTCTCCAGGTTGAATTGGTAAGCACTAATAGATTTTTCGACATGACTTATATTGTGACGCTCTATCCTGTGAGTATGGCAACAGCGGTTATAGTTAAGAACAAAGCTCCGAAGCCTGTTACTCTAACGAATGCGATACTAAGCCATTTTAGGTTTAAGAGAAGAGGTGGTGCTGCTATTAAAGGTCTTCAAACATGCTCATACTGTTCACACCCTCCTCTTGCTTCTCCTTTTCAAATCTTGAGTCCGTCGGAAGCAATTAAATCTGAGCCTAGTAGATTGATTTCCTTTGGTGCTGAGCCTGAATTGAAGCCTGGTTCATGGACTCAACAGGGAGTTCCTATTACTCTCCTTGAGAACAAGATGAGTAGAGTTTTTGCTGCGCCTCCAGAAGAAAGATCAAAGGCGTTTTATAACACACCGCCTTCGAAATATGAAATCATTGACCAGGGACGTGAGATTTTCTACAGGGTGATAAGAATGGGATTTGAGGATACTTATGTGTCAAGTCCTGGTTCCATGTCTGAGAAATATGGAAAGGATTACTTTGTATGCACTGGTCCTGCTTCAATGTTGGTGCCTGTTACTGTGAATCCTGGTGAAGAATGGAGAGGAGCACAAGTTATTGAGCATGATAATCTCTCATAA 1068 0.4092 MASFLSLSLPKLNLIKASSAATTTTPLSTPEALNEKFGRKGIKFLETNSIPIVELTVRNGSSLSLRLPDAHVTSYKPKVFWKDDGFEEFLYTIPASETGLYKAKGGIGLVLNEVLQPGAKELLPSTLEWTVKDVDYDAIDALQVELVSTNRFFDMTYIVTLYPVSMATAVIVKNKAPKPVTLTNAILSHFRFKRRGGAAIKGLQTCSYCSHPPLASPFQILSPSEAIKSEPSRLISFGAEPELKPGSWTQQGVPITLLENKMSRVFAAPPEERSKAFYNTPPSKYEIIDQGREIFYRVIRMGFEDTYVSSPGSMSEKYGKDYFVCTGPASMLVPVTVNPGEEWRGAQVIEHDNLS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01994 355 SUPERFAMILY Galactose mutarotase-like 43 349 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vifa5g01994 355 Gene3D - 48 355 IPR014718 GO:0030246
Vifa5g01994 355 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 49 350 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01994 - - gmx:100805680 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01994 5 666133357 666134636 Vifa5g01994 5 666133357 666134636 ECH
Vifa5g01994 5 666133357 666134636 Vifa1g08172 1 1276810179 1276811546 PCT