Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08172 ATGGCTTCTTCAACTTCACTTTTTTGCTCCAATTTCTTCATTCCAAAATCTACTAGAAACACACTACCATCAACACAATTTTGTTTACCTTTTTCTAGCTATATTCAACACAATCATTACAAGAAATTTTTTCCACTTCCAAAAGTAGCTTCTGTGCCTTACCAACCAATCAACTTTGATTATTTACAACAAGAATTCAATGGACATGGAGTCACTTTTGAAGAAGTTGGTGGAAGTTGTATGGCCAAAATGGAATTGAAAAATGGAAGCATTGCTACCATTTTGCTACCAAGTGGATTGATTACTTCCTATAAAGCACCTATGTGGCATGGTGCAAAAGTTGAGCTTCTTCATACTGCTGTCTCAGAAAGTGAACTTGGTGATGCCATTATTCAAGGCAATGCCGAAGAATCTATTCAGGTAGAATTAATAAACAAAGGACCGGATGGTAAGACTGGATTAAAATACATTGTGACATTGGAAGAAGATGGATTAGGCTCCGAGCTTGAAATCTCAAACTCAAACTCTTCGCCTCTTCAGATGACAGGTTCCATCTTGACTCATTTGACAGTAAGCAATCCAGAAGCAACATATGCAATAGGATTAGATAGATCGAATTACTATATCCGACCGCCTTTTGAATCGGAGTTCATTTTGAGTCCTCCGGATTCAAGCGAGGATAAGGGATTAGAAAAAACATGGAAATCTTCTGTTAAGCAGTTTTTTTCTGGTTGGGGAACTAACAACCAAAACAATGAAGTGGAAGGAAGTCAAAGTGATAGTGAAGACATGATTGGTGAAGAAACAGATACTTACAAACAGTTAAAAGAAAGAATAAGTCTCGTATACACGGACGCGCCTCGAAGTTTTACACTAATCGATAGGGGTAGAAGAAACTCGGTTTTAGTTGGAAGGAATGGATTCAATGAAACCTACTTGTTCAGTCCTGGCTCATCCGGCATTGAAAGTTACAGCAAGTATGCTTATATATGTGTTGGTCAAGCTGCTGTCCTCCAACCAATAGTATTAAGTTCACAAAATGCATGGAAAGGAGGACAGTATCTACACAATCCAAATCTATAA 1083 0.3786 MASSTSLFCSNFFIPKSTRNTLPSTQFCLPFSSYIQHNHYKKFFPLPKVASVPYQPINFDYLQQEFNGHGVTFEEVGGSCMAKMELKNGSIATILLPSGLITSYKAPMWHGAKVELLHTAVSESELGDAIIQGNAEESIQVELINKGPDGKTGLKYIVTLEEDGLGSELEISNSNSSPLQMTGSILTHLTVSNPEATYAIGLDRSNYYIRPPFESEFILSPPDSSEDKGLEKTWKSSVKQFFSGWGTNNQNNEVEGSQSDSEDMIGEETDTYKQLKERISLVYTDAPRSFTLIDRGRRNSVLVGRNGFNETYLFSPGSSGIESYSKYAYICVGQAAVLQPIVLSSQNAWKGGQYLHNPNL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08172 360 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 137 357 - -
Vifa1g08172 360 Gene3D - 110 358 IPR014718 GO:0030246
Vifa1g08172 360 SUPERFAMILY Galactose mutarotase-like 90 355 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08172 Vifa-Chr1 1276810179 1276811546 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08172 - - gmx:100775728 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01994 5 666133357 666134636 Vifa1g08172 1 1276810179 1276811546 PCT