Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01552 ATGACTTTTTTCAATTTTGTGCTTCTCTTCTTTTGTTCCTTTGTTCTACTCTCTGCAAATGGTGAACCCAGCAGTAAAGGTGAAACCTTTATTGTTTCAAGCTTCAGCTACCCTCATACTAGGCTCAGACCCTTTGATTTGCGCTATATTAGAGTTGACTTGCCGTCATGGTTTTCTTCGATGTCTATAGCAATGAATTCAGATGTAGACCTTGATGTCTCTAGAATCGAAAGAGTTCCAATGAGCACACTGCCAATAATATGCTTTAGAGACGGAGGTCCTCCACTGCCAGATGCCCTAAACTTAACTTTGAAAGATTCCGCCATCTCAGGCATAAATGGTTTAGATGTGGAACAATGCTTCCCTATGCAGAAAAATATCACTATGAAACTGACAAACAATCAGATATCTCCAGGTGTTTGGTTCATTGGTCTTTTCAATGGCATTGGACCTACAAGAACACAGTCGAAGATGATTGTCCGAGGTCCAGCATACTCCTTTGCTGCCAATATAACTGTCGAAGCATGTACAAATTCAATGATGATGGGAGATTTCTGTAACAGTCCCGTTTATCCATTTTCATGCACAACATCTAATGTCAATAGTACTTTGAAAGCTACAACGGTGAACGAGACAATGCTGGAAAATTTGATGACCTGCAAAAGTAGTTTGAAAACTTTTTGTGCTGATGAAAGCGTATCATACATTTTCTCCTTTGATATAATAAATGTGGCAGACGAATTTACTATTATGGCAAGTGATGTCAAATTCAATGTCACGCCTTCAAACAAAACATCTGGTGCAAATGATGTCAGTTTAATGTGCTTTGTTCGCCATGGTTCAATGCCTTCAGTTGCTTCGTTCGATTACTCCAGTGATTTAAGTAAAGTGCCGCTGGTTATTCATTCTCCATTAATCGGTCGTTGGTACATTACTATTGTACCGATCAATCCTATAAAGATACAAGATAGCAATGTAAGGGTTTGCTATTCAGTGGAATCTCATGTGCTTCAATGCCCACTTGGGAAGGCTGGTCCAAATTGTACAATGGATATTTACACGCTTCAGACATTTGTACGGAGAGGTCCAACTCCCTTTGAATCATATTATTTACCGGTTAGCGCTGGAGCATCTTATACTTCTGCCAATTTCCCTCTTGAACCACTTTTGAGTAACTCATCATACAATGGCGAACCTGGTAACATTTGGACTTATTTACTTTTGGACATTCCTCGTGGTGCAGCCGGAGGAAATATTCATGTACAACTATCCTCAGACGTGAAGATCAATTATGAAGTTTACATTAGATTTGGTGGACTACCATCTCTTATTAACCGAGACTATCATTATGTTAACAAGTCAATAAAAAGCGACACATCTATGTTTTTCATGCTATATGATTCGAGTGATGACAAGATCAATTTCTATATTATGTATGCTAGAGAAGGAACTTGGGGTTTTGGTCTTAGATATCTTAATACCAGCCACGATCCTTCAAAAGGGCCAACTGTCATGTCTCTTTCGCTTGAACGATGCCCGAAACGTTGTTCCTCTCGCGGGGACTGTAAATTTTCTTTTGATGCAAGTGGCTTGACATCATACAGCTTCTGCTCTTGTGATCGAAACCATGGAGGCATCGACTGTAGCATTGAAATTGTATCACATCAAGGGCATATACGACAATCATTTTTTCTCATTGTATCAAATGCTGCGGCCATACTTCCTGCCTATTGGGCTCTTCGGCAGAAGGCATTAGCAGAATGGGTTTTGTTCACATCTAGTGGAATTGCTAGTGGACTATATCATGCTTGTGATCTACCATTGATGAAGTATTGA 1836 0.3971 MTFFNFVLLFFCSFVLLSANGEPSSKGETFIVSSFSYPHTRLRPFDLRYIRVDLPSWFSSMSIAMNSDVDLDVSRIERVPMSTLPIICFRDGGPPLPDALNLTLKDSAISGINGLDVEQCFPMQKNITMKLTNNQISPGVWFIGLFNGIGPTRTQSKMIVRGPAYSFAANITVEACTNSMMMGDFCNSPVYPFSCTTSNVNSTLKATTVNETMLENLMTCKSSLKTFCADESVSYIFSFDIINVADEFTIMASDVKFNVTPSNKTSGANDVSLMCFVRHGSMPSVASFDYSSDLSKVPLVIHSPLIGRWYITIVPINPIKIQDSNVRVCYSVESHVLQCPLGKAGPNCTMDIYTLQTFVRRGPTPFESYYLPVSAGASYTSANFPLEPLLSNSSYNGEPGNIWTYLLLDIPRGAAGGNIHVQLSSDVKINYEVYIRFGGLPSLINRDYHYVNKSIKSDTSMFFMLYDSSDDKINFYIMYAREGTWGFGLRYLNTSHDPSKGPTVMSLSLERCPKRCSSRGDCKFSFDASGLTSYSFCSCDRNHGGIDCSIEIVSHQGHIRQSFFLIVSNAAAILPAYWALRQKALAEWVLFTSSGIASGLYHACDLPLMKY 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01552 611 Pfam Protein of unknown function (DUF3522) 558 606 IPR021910 GO:0016020
Vifa5g01552 611 ProSitePatterns EGF-like domain signature 1. 537 548 IPR000742 -
Vifa5g01552 611 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 9 607 IPR021910 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01552 Vifa-Chr5 451658069 451663756 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01552 - - gmx:100778959 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01552 5 451658069 451663756 Vifa5g01552 5 451658069 451663756 ECH
Vifa5g01552 5 451658069 451663756 Vifa4g00916 4 265367663 265371839 PCT