Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00916 ATGCTTTTCAATTCGATTTTGTTCTGTCTTCTCACTGTTTTCTTACTTTTCACTTCTTCATATGGTTCTGCCTCCTTCACTCTTTCCACCTTCACCTTCCCTCAAACCACTCTTGGACCCTACGGTTCTAGTTATATCAGAGTTGATATACCGCCATGGTTTTCTGCAGTCTCCGTTGTGTTGACCTCTGATGTAGTAGACCTTGATGTTGCAAGAATCGAAAGGGTTCCAAAAAGTTCGCTGCCGATAATATGCTTTAGAGATGGAAGTCCTCCTCTACCTGGTGCTTTAAACACATCTCTGAAATTATCAACTGTCTTAGGAATAAATGGTCTTGATATTGAGCAATGTTTTCCTATGGAGAAAAACATCACTATGAAGTTAACTAATGAGCTGATATCTCCAGGTGCTTGGTACATTGGTGTTTTTAACGGCTTTGGAGCTGCAAGAACACAATCCAGGATGATCATTCGAGGCCCGTCGTACTCCTTTAGCGCCAATATAAGTGTGGAAGCTTGCACAAATTCGATGATGAGTGGGCAGTTCTGTAACACTACCGTCAATTCACTTTCATGCACAGCATCCGACGTCCATAACTCTTTGAAATCTACAGTGAAGAAACCAACGATTGAAAATGCGATGACCTGCAAAAGTAACTTTGAAACTCTGTGTGTTGAGGAAGGTGTACCAAACTTATACTCCTTGGATATAACGAACGCGGTAGAAGAGTTGACCATTATGGCAGGAAATATCAAACTCAATATTACATCTTCAAGTAACGCTTCTGGTGCAAGCGATGTTAAATTATTGTGTTTTGCTCGCCATGGCGCGATGCCTACAAATACTTTGTACGCTTATTCCAGTGATTTAAATAAATCCGCTCTGGTTATTCATTCTCCACTGATCGGTCGTTGGTACATTAGAGTATTACCGGTAAATCTTACAAAAACAATTGGAGATACTCATGACAGTGATGCAAAAGCTTGTTATTCGCTTGAATCACAAATGCTACAATGCCCATTTGGAAAAGCTGGACCGAATTGTACAATGAGTAGCTACACACTTCAGACAGTTCTAAAGAGAAGTGCAATCCCGTTTGAATCATATTATTTGCCTATTGGTGAAGGAGCATCTTCTGCAAAATTTCCTCTTGAGCCACTTTTAAACAACTCATCAAAATTCGGAGAAACTAACGAAACATGGACGTACTTTACTCTCGACATTCCTCACGGTGCAGCTGGCCGAAATATTCACGTACAGCTATCCTCAGATACAAAGATCAGTTACGAAGTTTATGCAAGATTTGGTGGATTGCCTTCTGTTTATATCCGGGACTATTATTATGCTAACAAGACATCAAAAAGCGATCAATCCGTGTTTTTCATGCTAAATGATTCAAGCGACAAAAATATTGATTTTTACTTAATTTATGCTAGAGAAGGAACTTGGAGTTTTGGTGTAAGACATGTTAATAGTAGCAGTGATTCTTTGAAGCAGAAAACTATCTTGTCTATTTCACTTGAAGGATGTCCGAACCAATGCTCCTCTCATGGCAACTGTAAATATTTTTTCGATGCTACCGGATTGACGTCATACAGCTTCTGTGAATGTGATCGAAACCATGGTGGCTTTGACTGTAGCATCGAAATTGTATCACATAAAGGCCACATACTTCAATCAATTTTTCTGATTGGATCAAATGCCGCGGCTCTACTTCCTGCATATTGGTCGCTTCGACAGAAGGCATTTGCAGAATGGATTTTATTTTCAGCCAGCGGAACTGCGAGTGCAATATATCATGCATGCGACGTAGGCACCTGGTGTGCATTGAACTTCAGTGTTCTACAGTTTATGGACTTCTGGCTCTCTTTCATGGCGGTGATCAGCACTTTTGTATACCTAGCCACCATCGACGAAGTACATAAGCGGGCGATCCACACAGCGGTTTCTATCTTTACTGCTCTCATAGCAGTAACTAACGCAACCAGGTCTTCTAATGTTGTTTATGTGATTGTTATCGGGGTTCTTGGTCTTCTTATTGGATGGTTGATAGAAATGTCATCAAAATATAGGTCTTCTTCCTTTTCATTTGAAGTCTCTCCAAATTTCCATCAAAGTTTGTTAACTATAAAGCTATGGTTCTATAACCTTGTGAAGGCACTTATTAGACGGTTCCGTTGGGGTTTTATATTGGCCGGATTCGCCGCATTAATCATGGCAGGAATAGGCTGGATACTTGAAACAAGTGAGACCTATTGGATCTGGCATAGCTTTTGGCATGCTGCAATATACACATCTTCTTTCTTCTTCCTTTGTTCAAAAGCAGATATTGGTGATGCTGAGAATCAGCCACCTAGAAGTGAAAGCTATGAACTAGCTCGTCAGGATTCATTTTCAAGAGAATATTAG 2409 0.4027 MLFNSILFCLLTVFLLFTSSYGSASFTLSTFTFPQTTLGPYGSSYIRVDIPPWFSAVSVVLTSDVVDLDVARIERVPKSSLPIICFRDGSPPLPGALNTSLKLSTVLGINGLDIEQCFPMEKNITMKLTNELISPGAWYIGVFNGFGAARTQSRMIIRGPSYSFSANISVEACTNSMMSGQFCNTTVNSLSCTASDVHNSLKSTVKKPTIENAMTCKSNFETLCVEEGVPNLYSLDITNAVEELTIMAGNIKLNITSSSNASGASDVKLLCFARHGAMPTNTLYAYSSDLNKSALVIHSPLIGRWYIRVLPVNLTKTIGDTHDSDAKACYSLESQMLQCPFGKAGPNCTMSSYTLQTVLKRSAIPFESYYLPIGEGASSAKFPLEPLLNNSSKFGETNETWTYFTLDIPHGAAGRNIHVQLSSDTKISYEVYARFGGLPSVYIRDYYYANKTSKSDQSVFFMLNDSSDKNIDFYLIYAREGTWSFGVRHVNSSSDSLKQKTILSISLEGCPNQCSSHGNCKYFFDATGLTSYSFCECDRNHGGFDCSIEIVSHKGHILQSIFLIGSNAAALLPAYWSLRQKAFAEWILFSASGTASAIYHACDVGTWCALNFSVLQFMDFWLSFMAVISTFVYLATIDEVHKRAIHTAVSIFTALIAVTNATRSSNVVYVIVIGVLGLLIGWLIEMSSKYRSSSFSFEVSPNFHQSLLTIKLWFYNLVKALIRRFRWGFILAGFAALIMAGIGWILETSETYWIWHSFWHAAIYTSSFFFLCSKADIGDAENQPPRSESYELARQDSFSREY 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00916 802 Gene3D - 338 550 - -
Vifa4g00916 802 PANTHER FIVE-SPAN TRANSMEMBRANE PROTEIN M83 5 800 IPR021910 GO:0016020
Vifa4g00916 802 Pfam Protein of unknown function (DUF3522) 556 760 IPR021910 GO:0016020
Vifa4g00916 802 MobiDBLite consensus disorder prediction 781 802 - -
Vifa4g00916 802 ProSitePatterns EGF-like domain signature 1. 535 546 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00916 Vifa-Chr4 265367663 265371839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00916 - - gmx:100777848 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01552 5 451658069 451663756 Vifa4g00916 4 265367663 265371839 PCT