Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g01465 ATGGTTATTTTTGCTTCTCTTCAAGGCCTTCATGGTTCTCTTCTAAGATCCCAATTCCTAAGCCTAGATCTTCAATTTCCTCTCATAAAAACATCCAAGAGAAACCATAGAAATCTAACTTGTCAACCCAAAATATGTGCTGAATTCAACATACTAAAAATGATGGGAGGAAGAGGATTATGCAATGGAGAGAAAGGAGTTGAAAAAGAGCTGAAGAGGAAAATTGATAAAGAGGAAACACCATCACCATCACCATCATCATCATCCAATGAAAAAGTGCAAGAAAACTCAGAAAAGTTGACTAGTGATATTGTTGAAATTCCAGAAGATGGTTTTGAGAAGGAAATGATGGGGCTAACTGGAGGGTTTCCAGGTGGTGAAAAAGGTTTGATCAAGTTCATTGAGGAAAATCCACCTAGAAAAATCTCTCAAACTTTTAGTGTTGAAGAAAGAAATCAAAGTGTTGTTGAAGAATCCAAACCATCATAG 489 0.364 MVIFASLQGLHGSLLRSQFLSLDLQFPLIKTSKRNHRNLTCQPKICAEFNILKMMGGRGLCNGEKGVEKELKRKIDKEETPSPSPSSSSNEKVQENSEKLTSDIVEIPEDGFEKEMMGLTGGFPGGEKGLIKFIEENPPRKISQTFSVEERNQSVVEESKPS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g01465 162 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 3 161 IPR021659 GO:0009767
Vifa5g01465 162 MobiDBLite consensus disorder prediction 69 103 - -
Vifa5g01465 162 MobiDBLite consensus disorder prediction 138 162 - -
Vifa5g01465 162 MobiDBLite consensus disorder prediction 81 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g01465 Vifa-Chr5 434952668 434953156 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g01465 K00345 - psat:127127128 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01465 5 434952668 434953156 Vifa4g00565 4 162585191 162586030 PCT