Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00565 ATGTCTTCCTTTGTTTCCCTTAATACCCTTCATGGCTCTCTTCTAAGATCCAAATTCCTAGGCCAAGAAAATCTCACTCATCTTTATCCTCACAACAATAAAGCTTCCATGTTTCACAGCAAACCAGCCTACAAAACAGTACGGATATGTGCCGAATTCGACCTGCTGCAAATCATGGGAGGCAGAGGACTCTGTAAAGGAGAAGAAGGACTTCAAAAAGAGCTCAAAAGAGAAATTGGTTCCGATGATCAGAATCAACCACCATCATCAGAAGCAGCTAGTAACAACTCAACACAGTCCTTTGAAAGTGTTGCAGAAGCTAGTAACAACTCAACACAGTCCTTTGAAAGTGTTGCAGAAGCTAGTAACAACTCAACACAGTCCTTTGAAAGTGTTGCAGAAGCTAGTAACAACTCAACACAGTCCTTTGAAAGTGTTGCAGAAGACGGTTTTGAGAAAGAGTTAATGGGATTAACCGGAGGGTTTCCTGGAGGTGAAAAAGGGTTGAGAAAATTCATTGAAGAAAACCCTGTTCCAAAACCTGATGCAGATGACAAAAGACTTAAACTTTCATCGTCAGAAAAGGCGAAACCACCAGAACTTCCTATGTTACTTCCAGGAATGATTGCTATTGTGAAGAATCAAAATAATCCATTTTACATGTACTGCGGCATTGTTCAAAGAATCACTGATGGTAAAGCAGGAGTGCTGTTTGAAGGAGGGAATTGGGATAAGTTGATCACTTTCAGGCTTGATGAACTAGAGAGAAGAGAAAAAGGTCCTCCTATGAAGAATCCTAAGTCTTGTGTTCTTGAACCATTTCTTGTAAAGAAAACATAG 840 0.4024 MSSFVSLNTLHGSLLRSKFLGQENLTHLYPHNNKASMFHSKPAYKTVRICAEFDLLQIMGGRGLCKGEEGLQKELKREIGSDDQNQPPSSEAASNNSTQSFESVAEASNNSTQSFESVAEASNNSTQSFESVAEASNNSTQSFESVAEDGFEKELMGLTGGFPGGEKGLRKFIEENPVPKPDADDKRLKLSSSEKAKPPELPMLLPGMIAIVKNQNNPFYMYCGIVQRITDGKAGVLFEGGNWDKLITFRLDELERREKGPPMKNPKSCVLEPFLVKKT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00565 279 Pfam NAD(P)H dehydrogenase subunit S 204 255 IPR021659 GO:0009767
Vifa4g00565 279 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 104 IPR021659 GO:0009767
Vifa4g00565 279 MobiDBLite consensus disorder prediction 175 195 - -
Vifa4g00565 279 Gene3D - 198 268 - -
Vifa4g00565 279 MobiDBLite consensus disorder prediction 175 194 - -
Vifa4g00565 279 MobiDBLite consensus disorder prediction 79 144 - -
Vifa4g00565 279 MobiDBLite consensus disorder prediction 82 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00565 Vifa-Chr4 162585191 162586030 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g00565 K00345 - gmx:100527145 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g01465 5 434952668 434953156 Vifa4g00565 4 162585191 162586030 PCT