Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa5g00297 ATGAAAATTATAAAGAAGCTCACTTTCTACTTCCATAAATTATTGGAAATGTTAGCAGTAAGAAATGAAGAAGGTATCACAGTGAAATTCAACAAAGATATCAATTTCAATACTTTCTATAAGCCTTATCATGTTACTACTAGTACTAGTACCGAAGAAGACAAAGAATGTATAGGTTTGAAGGTGGCATTGTCATGCAAATATCTAATTTCACAGAATGATAATTCTGATACAGAAGATGAAGCTGAGGATTTGGTGTTGTTAGATAAACAAAGTCACTCAGTTTTGTCACCGAAAAAACCAGAAGTTGTAATGTTGTTTTCTTCTTCTCTGATTGCTGATTCTGACCGCGATTTAGCTGCAACGAAGCTGCAGAAAGTTTATAAGAGTTACAGGATTAGAAGATATCTAGCAGATTTAGCCGTTGTTTGCGAGGAACTGTGGTGGAAGGATTCAGACTCTTCTGCTTTTCAAAGGTGTTTAATTTCGCATTTTGATTCTGATAAGTCTGAAACCGCTATTTCAAAATGGGCAACAGCAAGAACAATAGCTGCTAAGATGGGAAGAGGATTGTCTAAAGATGATAAGGGGCAAAGATTAGCTAGAAAACACTGGCTTGAAGCTATTGATCCTCGTCATCGATACGGACACAACTTGCATTTCTATTATGATGTTTGGTTTCAGTGCCAAAGTTCTGAACCCTTTTTCTATTGGTTGGATATTGGAGATGGCAAAAGAGTAGATATTGTCATATGTTCAAGAAAGAAATTACAGAGGCAATGCATAAAGTACCTTGGACCTATAGAAAGGGAAGCATATGAAGTAACTGTGGCAGGAGGGAAGCTTGTTTATAAACAAAGCAAGAATCTTGTACACACAACTGAGGGATCTAAGTGGATTTTTGTTCTTAGTTCATCTCGAGTTTTATATGTTGGACAGAAGGAGAAAGGAAAATTTCAGCACTCAAGTTTTGTAGCTGGCGCTGCTACCATTGCATCTGGAAGAATTGTTGCTCACAATGGAGTACTTCATGTTATATGGCCTTATAGTGGTCATTATCGTCCAACCGAGAAGAATCTTATGGAATTCGTTCACTTTTTGGAGGAACATCATGTGGATATGACAAATGTAAAGAAACATCCTGTTGATGATGATATTCCACCTCCTGTAAAACCTGTGGATGAGGAGCTTCACATTGAGCACATAGAAAATGTTGAAAGTAACAAGGCATTGTCAAGCAAATGGACAACTGAAGTTGGTTCTAGGATTGGTTACGTGAGAGAGTATCCATCGAAACATCAACTTCAGGCACTTGAAGAGCTCAATCCAACACCAAAAGCCAACAATGGAACATTTGAAGACAAAACAACCCTTCCCTCTTTAAGGGCTAGACAAGAAAATCTTCTGTCACGTAGGCTTGAAACCATGGAACCTATCTAG 1440 0.3778 MKIIKKLTFYFHKLLEMLAVRNEEGITVKFNKDINFNTFYKPYHVTTSTSTEEDKECIGLKVALSCKYLISQNDNSDTEDEAEDLVLLDKQSHSVLSPKKPEVVMLFSSSLIADSDRDLAATKLQKVYKSYRIRRYLADLAVVCEELWWKDSDSSAFQRCLISHFDSDKSETAISKWATARTIAAKMGRGLSKDDKGQRLARKHWLEAIDPRHRYGHNLHFYYDVWFQCQSSEPFFYWLDIGDGKRVDIVICSRKKLQRQCIKYLGPIEREAYEVTVAGGKLVYKQSKNLVHTTEGSKWIFVLSSSRVLYVGQKEKGKFQHSSFVAGAATIASGRIVAHNGVLHVIWPYSGHYRPTEKNLMEFVHFLEEHHVDMTNVKKHPVDDDIPPPVKPVDEELHIEHIENVESNKALSSKWTTEVGSRIGYVREYPSKHQLQALEELNPTPKANNGTFEDKTTLPSLRARQENLLSRRLETMEPI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa5g00297 479 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 79 454 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa5g00297 Vifa-Chr5 44372099 44374503 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa5g00297 - - gmx:100786055 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa5g00297 5 44372099 44374503 Vifa5g00297 5 44372099 44374503 ECH
Vifa4g01341 4 398253678 398256686 Vifa5g00297 5 44372099 44374503 PCT