Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g01341 ATGATGACGATAACCGGAGATGTTATTGCTGAAGAGAAACAACATGTTCAAAGAGAAGGAAATCCTTCTATTTTGTTGGATAAGCCAGAAATTTGGTTTTCACCAAAATCCATTGGAGAGCTTGATGTTGCTGCAATAAAGCTGCAGAAGGTTTATAAGAGTTATAGGACTAGAAGGAATTTAGCAGATTGTGCTGTTGTGTGTGAAGAGCTATGGTGGAAGGCTTTAGATTTTGCTGCACTTAGTAGGTGTTCTATTTCACATTTTGATTCAGTTAAATCAGAAACTGCTCTTTCAAAATGGGCTAGAGCTAGAACTATGGCTGCTAAGGTGGGAAAAGGATTGTGTAAAGATGATAAAGCACAAAAATTAGCACTTAGACATTGGCTTGAAGCTATTGATCCTCGACATCGATATGGACACAACTTGCACTTATACTATAATGTTTGGTTTCATAGCCAGAGCACTCAACCTTTTTTCTATTGGTTGGATGTTGGAGATGGAAAAGAAGTAAATCGTGACGAATGTCCAAGAATTGATTTACAGAAGCAGTGTATAAAATATCTTGGACCTAAAGAAAGGGAGGTTTATGAAGTGATTATGGAGGAAGGAAAATTTGTTTATAGGAAAAGCAAGAACTTTGTACACACTTATGAAGGATCTAAGTGGATTTTTGTTCTTAGCTCTTCAAGAATTTTATATGTTGGAGAGAAGAAAAAAGGACAATTTCAACACTCAAGTTTTCTAGCTGGTGGTGCTACTATTGCTTCTGGAAGATTGGTTGTCCAAAATGGTGTTCTTCATGCTATATGGCCCTATAGTGGTCACTATCGTCCTACAAAGAAGAATTTCATGGAATTCATTGGCTTCTTGATGGAACACAATGTGGATTTGACAAATGTAAAGAAGTATCCAATTGATGATGATGTTCCACCTCCAGAACATGTTGACAATGAGGTTCACTTTGAGTCCACCAAGACTAATGTAACATCAAGTGACTCTATCAAGTGTAGCCAAAACAATGTGACAACTTCACAACATAAAGAGTGCAAACCTTTGTCAAGCAAATGGACCACAGGAGCTGGTCCTAGGATTGGTTGTGTGAGAGAATACCCTACAAAACTCCAAGCTAAGGCCCTTGAACAACTCAATCTATCACCTAGAGTCAACAATGGAAAAGTCACTAATATGATACCTATTCCTTCACCAAGACCTAGTCCAAAAATTCACTTGTCTCCTAGACTTGTGCATATGGGAATTCCAAGTCCGAGAGTACACGTTACTTCGGCAAATTAA 1296 0.3796 MMTITGDVIAEEKQHVQREGNPSILLDKPEIWFSPKSIGELDVAAIKLQKVYKSYRTRRNLADCAVVCEELWWKALDFAALSRCSISHFDSVKSETALSKWARARTMAAKVGKGLCKDDKAQKLALRHWLEAIDPRHRYGHNLHLYYNVWFHSQSTQPFFYWLDVGDGKEVNRDECPRIDLQKQCIKYLGPKEREVYEVIMEEGKFVYRKSKNFVHTYEGSKWIFVLSSSRILYVGEKKKGQFQHSSFLAGGATIASGRLVVQNGVLHAIWPYSGHYRPTKKNFMEFIGFLMEHNVDLTNVKKYPIDDDVPPPEHVDNEVHFESTKTNVTSSDSIKCSQNNVTTSQHKECKPLSSKWTTGAGPRIGCVREYPTKLQAKALEQLNLSPRVNNGKVTNMIPIPSPRPSPKIHLSPRLVHMGIPSPRVHVTSAN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g01341 431 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 19 409 IPR044159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g01341 Vifa-Chr4 398253678 398256686 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa4g01341 - - gmx:100805874 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g01341 4 398253678 398256686 Vifa5g00297 5 44372099 44374503 PCT